Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187734542

Identifier: 187734542

GI number: 187734542

Start: 33610

End: 34827

Strand: Direct

Name: 187734542

Synonym: Amuc_0026

Alternate gene names: NA

Gene position: 33610-34827 (Clockwise)

Preceding gene: 187734541

Following gene: 187734549

Centisome position: 1.26

GC content: 56.16

Gene sequence:

>1218_bases
ATGCTTCATCACATCAATCCCGTTTCCGGCCTGCTGGCCGCAGCCCTCTTCCTGTCCGCCCCTGTTCAGGCGGCCCTCCC
CGTTTACAGCGCCGTGAAAGACGAGGCGAAAACCGTCAATAAATACATGATCGTCGTATGGGCCGGCACGGACTGGTCCC
CAAAATCACGTGAAATCACCCGCGCTGTGGAACACCTGGCCAAGAACTCCCCGGAACCCGTGCTCTGGTGTATCCAGGAC
GAGCGTGAGGAAATGACGGAAGAAGAGCAGAAACTGCCCAAGCCCCCGGGGGAAATCTGGAACATCCCCGCCATTCAGGT
GGTCTCCCCCACCGGAAACATGGTATTCCTGTCGGAAGGTGTCTCCAGGGAAACATTGCCAGCCGTCATGAAGCAGGCAA
TGGAAGCCGTAAAACAGCAAAACAAGGCCAATGCCCTGTGGGAAAAAGCCGCCGCTTCATCCGGAACGGCCGCGGCCCTT
CTTTACGGAGAAGGGCTTCAGCAGCTTCCTCCTTATGCGGCCTCTTCCAGAAAGGATATTCTGGAAAAAATCAAGAAGGC
GGATCCGGAAGACATCAAGGGAGTGCACTTCAAATACACGTTCAGGCATCTGCCCTACATCGAAAAAGTGCAGAGAATGG
TGAATGATTCCGCCAAAGACGGCGGTCCAAAGGATTACAAAACCGCCCATGCCTATGTAAACAAACAGCTCAAAACCCCC
GGCCTGACTCCCCTTCAAAAACAACAGGTCATGGCGGCCAGGTTCTGGCTCTACCGCAATGAAGGGAAAAAGGACCAGGC
GCTGAAGACCCTGACGGACATCGCCAGGATATCCCCTAAAACCCTCATGGGAATAGGCGCCCAGAACTACTACCGCTACC
TGACGGAACCCGTCACCCTGAAAAGTCCTCACTTCACAGGCTACGACCTGCGTCCGGAACTGACGCCTACCCGCGTCAAC
GTCAGCAGCATGCTTGACGGCCCCGGAAACTACAAGATTACCTTCAAGATGAACAGCGGCGGCTGCAATATCCGCAACCC
CCGCTTCATGAAGGGCAACCGCGTAGTCAGCGAACTGCCCAAGGACCGGCAGGACAAAAACGGGCGCGAATTCACCCTGC
GCCTCTCCGGTTCCGAAAAGCCGGACTTGGTTTTCGACTGCCAGGGCCAGGGATGGTTCGATGCGGACTGCGACATCATC
GTGACCAAGGAATCCTGA

Upstream 100 bases:

>100_bases
AAAGCCAAGTGGATCAAGGTGGAAGCCAAAAACGCACAGCCGGAATTCATGCACCTGCGCCATATCCTCGTTTACGAAAA
ATAAATTCTCCATTAACGCC

Downstream 100 bases:

>100_bases
CTCCTGCCGGCAAACGAACAAAACCGCCATTCACAACCTTCACGAAGGCAGGACATTCCCAAGGAATTTCCTGCCTTTTT
TCCGATGGGAGAAGAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD
EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL
LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP
GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN
VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII
VTKES

Sequences:

>Translated_405_residues
MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD
EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL
LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP
GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN
VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII
VTKES
>Mature_405_residues
MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREITRAVEHLAKNSPEPVLWCIQD
EREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEGVSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAAL
LYGEGLQQLPPYAASSRKDILEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP
GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTLKSPHFTGYDLRPELTPTRVN
VSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELPKDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDII
VTKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45322; Mature: 45322

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREIT
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
RAVEHLAKNSPEPVLWCIQDEREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEG
HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC
VSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAALLYGEGLQQLPPYAASSRKDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCHHHHH
LEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP
HHHHHCCCCCHHCCEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTL
CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCEEE
KSPHFTGYDLRPELTPTRVNVSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELP
CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHCC
KDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDIIVTKES
CCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MLHHINPVSGLLAAALFLSAPVQAALPVYSAVKDEAKTVNKYMIVVWAGTDWSPKSREIT
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHH
RAVEHLAKNSPEPVLWCIQDEREEMTEEEQKLPKPPGEIWNIPAIQVVSPTGNMVFLSEG
HHHHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC
VSRETLPAVMKQAMEAVKQQNKANALWEKAAASSGTAAALLYGEGLQQLPPYAASSRKDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCHHHHH
LEKIKKADPEDIKGVHFKYTFRHLPYIEKVQRMVNDSAKDGGPKDYKTAHAYVNKQLKTP
HHHHHCCCCCHHCCEEEEEEEHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
GLTPLQKQQVMAARFWLYRNEGKKDQALKTLTDIARISPKTLMGIGAQNYYRYLTEPVTL
CCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCEEE
KSPHFTGYDLRPELTPTRVNVSSMLDGPGNYKITFKMNSGGCNIRNPRFMKGNRVVSELP
CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCEECCCHHHHHCC
KDRQDKNGREFTLRLSGSEKPDLVFDCQGQGWFDADCDIIVTKES
CCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA