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The map label for this gene is ompW [H]

Identifier: 186477538

GI number: 186477538

Start: 3142482

End: 3143204

Strand: Direct

Name: ompW [H]

Synonym: Bphy_2790

Alternate gene names: 186477538

Gene position: 3142482-3143204 (Clockwise)

Preceding gene: 186477532

Following gene: 186477539

Centisome position: 90.32

GC content: 57.4

Gene sequence:

>723_bases
ATGAAATTACAACAGGCCTTGGGGGTCGCGGCACTTGCTTGCATAACAACCACAGCGCACGCGCAATCGGCCGGTAGCAT
CTACTTCACAGCTGGGTGGTTCCATCTCGCCCCTCAGTCCAGTAGTCAGCCGTTAAGAGAGACGAACGTCAACGGCACGC
CAGTCAACATCACCTTGCCGAACACTGGCGCTACCGCCGGCGACGGCGACACCATCGGCTTTACGGCAGGCTATTTCTTC
ACCGACCATATCGCCACCCAGTTCGACGTCGGCATTCCGCCGCAATTCGACCTGAAGGGCAGCGGTGCGTTTCAGCAATA
CGGCAAGCTCGGCTCGGCAAAACAGTGGAGCCCAACGCTGCTGCTGAAGTACTACTTCAACCAGCCGCAGGCGAAGTTCC
GCCCGTATCTCGGCATCGGCGTGAGCCGCGTCTGGTTCACCGACGAGAAGATTTCGAACGGCACATTCCAGAACAACGTA
CTTCATGGTCCGACCACCGTCACGACGGATAGTTCGTGGGAGCCCGTGTTTAATGCCGGCTTCACCTATGCCTTCACCGA
TCACTGGTTCGCTGGCTTCTCAATCTCCTACCTGCCGCTTTCCACGACGGCCAAACTGAACACCACGGCGAATACGCCCA
TCGGTCCCGTCAACGTGCAATCGGAAACGAAGATTCGTCTGAACCCGATCGTCACGTATGTGAACCTCGGCTATCGCTTC
TAA

Upstream 100 bases:

>100_bases
GGAAACCGCATGAAACCTAGGCAGAACGCTCTAACCGGCGCGTATGGTTTGTTTGAAACGTTGTGGTCATAATTGGCGGG
CCTTTTTTGGAGGAGCACAA

Downstream 100 bases:

>100_bases
CACAACAGGTTAGACGAGATTTTCGGGCTTGAACAACGCCGGTTCGCAAAAGCGTGTCGGCGTATTTCCATGCAATCACG
ATACCTGTACGCATGCGCCT

Product: OmpW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKLQQALGVAALACITTTAHAQSAGSIYFTAGWFHLAPQSSSQPLRETNVNGTPVNITLPNTGATAGDGDTIGFTAGYFF
TDHIATQFDVGIPPQFDLKGSGAFQQYGKLGSAKQWSPTLLLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNV
LHGPTTVTTDSSWEPVFNAGFTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVTYVNLGYRF

Sequences:

>Translated_240_residues
MKLQQALGVAALACITTTAHAQSAGSIYFTAGWFHLAPQSSSQPLRETNVNGTPVNITLPNTGATAGDGDTIGFTAGYFF
TDHIATQFDVGIPPQFDLKGSGAFQQYGKLGSAKQWSPTLLLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNV
LHGPTTVTTDSSWEPVFNAGFTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVTYVNLGYRF
>Mature_240_residues
MKLQQALGVAALACITTTAHAQSAGSIYFTAGWFHLAPQSSSQPLRETNVNGTPVNITLPNTGATAGDGDTIGFTAGYFF
TDHIATQFDVGIPPQFDLKGSGAFQQYGKLGSAKQWSPTLLLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNV
LHGPTTVTTDSSWEPVFNAGFTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVTYVNLGYRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 26127; Mature: 26127

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQQALGVAALACITTTAHAQSAGSIYFTAGWFHLAPQSSSQPLRETNVNGTPVNITLP
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCCCEEEEEEC
NTGATAGDGDTIGFTAGYFFTDHIATQFDVGIPPQFDLKGSGAFQQYGKLGSAKQWSPTL
CCCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
LLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNVLHGPTTVTTDSSWEPVFNAG
EEEEECCCCHHHCCCEECCCEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCCHHCCC
FTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVTYVNLGYRF
EEEEEECCEECCCEEEEEECCCCEEEECCCCCCCCCEECCCCCEEEEEEEEEEEECCCCC
>Mature Secondary Structure
MKLQQALGVAALACITTTAHAQSAGSIYFTAGWFHLAPQSSSQPLRETNVNGTPVNITLP
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHCCCCCCEEEEEEC
NTGATAGDGDTIGFTAGYFFTDHIATQFDVGIPPQFDLKGSGAFQQYGKLGSAKQWSPTL
CCCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEE
LLKYYFNQPQAKFRPYLGIGVSRVWFTDEKISNGTFQNNVLHGPTTVTTDSSWEPVFNAG
EEEEECCCCHHHCCCEECCCEEEEEEECCCCCCCCCCCCEEECCEEEECCCCCCCHHCCC
FTYAFTDHWFAGFSISYLPLSTTAKLNTTANTPIGPVNVQSETKIRLNPIVTYVNLGYRF
EEEEEECCEECCCEEEEEECCCCEEEECCCCCCCCCEECCCCCEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]