Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yqjD [C]

Identifier: 186477539

GI number: 186477539

Start: 3143554

End: 3143937

Strand: Direct

Name: yqjD [C]

Synonym: Bphy_2791

Alternate gene names: 186477539

Gene position: 3143554-3143937 (Clockwise)

Preceding gene: 186477538

Following gene: 186477547

Centisome position: 90.35

GC content: 64.84

Gene sequence:

>384_bases
ATGACTGCACTACCCAATACGCGAGATGCTCTTGGCGAATCCTGGACTACGGCAGGCCGCCGTGCGCGCCGCATTGCGCG
CCATAGTCGACATGCCGCTGAAGACATTGCCAGCGAGCTGCGCACGCTCATGAACGAACTCGAGAACACACTCGGCGACG
GCACGCAGGCCGACGCGGCTGCATTGCGGACGCAATTGCGCAAGCGCCTCGACGACGCGCGCTCACGTCTGAACGATACG
CGCGACGTGATGCGCGATCGCGCGCAAGCGGCCATGCACGATGCGGATGACTTCGTGCATGAAAATCCGTGGCGCACGAT
TGCCGTGGTCGGCGGGCTTGCGCTGATCGCCGGCGCGTTGATCGCTCGCGGCGGCTCGCACTGA

Upstream 100 bases:

>100_bases
CGTGATGTGTCTTGCCTGGCGGGCACCGAAGTTGCGTCAGAGGATATTTCCCGCGCTGTGTTGCGGGGATGTTCAAACTA
CCCTCATCGACGGAGCGACC

Downstream 100 bases:

>100_bases
TGCTTCGTTGAGTGTGAGCGGCTGATCGCGCGGCCAGGCTGCCTGAAGACCGGATATCGGATCGCTGCGAAGGACGGAAA
GCGGCGCATGCTTTGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDT
RDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH

Sequences:

>Translated_127_residues
MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDT
RDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH
>Mature_126_residues
TALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDTR
DVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13950; Mature: 13819

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALRTQLRKRLDDARSRLNDTRDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IARGGSH
HHCCCCC
>Mature Secondary Structure 
TALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALRTQLRKRLDDARSRLNDTRDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IARGGSH
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA