| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yqjD [C]
Identifier: 186477539
GI number: 186477539
Start: 3143554
End: 3143937
Strand: Direct
Name: yqjD [C]
Synonym: Bphy_2791
Alternate gene names: 186477539
Gene position: 3143554-3143937 (Clockwise)
Preceding gene: 186477538
Following gene: 186477547
Centisome position: 90.35
GC content: 64.84
Gene sequence:
>384_bases ATGACTGCACTACCCAATACGCGAGATGCTCTTGGCGAATCCTGGACTACGGCAGGCCGCCGTGCGCGCCGCATTGCGCG CCATAGTCGACATGCCGCTGAAGACATTGCCAGCGAGCTGCGCACGCTCATGAACGAACTCGAGAACACACTCGGCGACG GCACGCAGGCCGACGCGGCTGCATTGCGGACGCAATTGCGCAAGCGCCTCGACGACGCGCGCTCACGTCTGAACGATACG CGCGACGTGATGCGCGATCGCGCGCAAGCGGCCATGCACGATGCGGATGACTTCGTGCATGAAAATCCGTGGCGCACGAT TGCCGTGGTCGGCGGGCTTGCGCTGATCGCCGGCGCGTTGATCGCTCGCGGCGGCTCGCACTGA
Upstream 100 bases:
>100_bases CGTGATGTGTCTTGCCTGGCGGGCACCGAAGTTGCGTCAGAGGATATTTCCCGCGCTGTGTTGCGGGGATGTTCAAACTA CCCTCATCGACGGAGCGACC
Downstream 100 bases:
>100_bases TGCTTCGTTGAGTGTGAGCGGCTGATCGCGCGGCCAGGCTGCCTGAAGACCGGATATCGGATCGCTGCGAAGGACGGAAA GCGGCGCATGCTTTGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDT RDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH
Sequences:
>Translated_127_residues MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDT RDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH >Mature_126_residues TALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAAALRTQLRKRLDDARSRLNDTR DVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGALIARGGSH
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13950; Mature: 13819
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALRTQLRKRLDDARSRLNDTRDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IARGGSH HHCCCCC >Mature Secondary Structure TALPNTRDALGESWTTAGRRARRIARHSRHAAEDIASELRTLMNELENTLGDGTQADAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALRTQLRKRLDDARSRLNDTRDVMRDRAQAAMHDADDFVHENPWRTIAVVGGLALIAGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IARGGSH HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA