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The map label for this gene is yrbD [C]

Identifier: 186477516

GI number: 186477516

Start: 3117733

End: 3118287

Strand: Reverse

Name: yrbD [C]

Synonym: Bphy_2768

Alternate gene names: 186477516

Gene position: 3118287-3117733 (Counterclockwise)

Preceding gene: 186477517

Following gene: 186477515

Centisome position: 89.63

GC content: 60.54

Gene sequence:

>555_bases
ATGAAAAAAACTGCTCTCGATTTCTGGGTAGGTCTGTTCGTGGTGCTCGGCTTCATCGCGTTGCTGTTCCTCGCGCTGAA
GGCGGGCAACATGAGCTCGCTGTCTTTTCAGGCGACGTACCCGGTCAAGCTGAAATTCGACAATATCGGCGGCCTCAAGG
TGCGTGCGCCCGTGAAGAGCGCGGGCGTGACGGTGGGGCGCGTGGGGGCGATCGGCTTCGACAGCAATTCGTATCAGGCG
CTCGTGACACTTGATCTCGACAAGCAATATCAGTTTCCGAAAGACACGTCGGCGAAGATTCTGACGTCGGGCCTGTTGGG
TGAGCAGTACATCGGTCTGGAGCCGGGTGGCGACAGCGAAATGCTGAAAGCCGGCGACACGATCTCGATGACCCAATCGG
CCATCGTCCTGGAGAATCTGATCGGGCAGTTCTTGTACAACAAGGCGGCGGATTCCGGGGCTGCCAAATCCGGTGCACCC
GCTGCGGCGCCCGAGCCTGCAGCACCGGCTCCCGCAGCGCCTGCTGCGGCCGTTTCGGGTGCATCCGGGCAATAA

Upstream 100 bases:

>100_bases
GACCGCGCTGATGTTCAGCTAGGCGGCGCCGCACCGAACCCTGCGCGCCGCGCCGCGCAGGCAGTGCGCCGCTGCGGCAT
AGATTCTCTTTGGGATGACG

Downstream 100 bases:

>100_bases
GGAGAGAACAACAATGATGACGACACGCTTACGTGTCGCGGGGATCGCGCTGGCTGTGGCAACGTTTGCCGGTTGTGCAA
CCGTTCAGAACCCGACGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKSAGVTVGRVGAIGFDSNSYQA
LVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDSEMLKAGDTISMTQSAIVLENLIGQFLYNKAADSGAAKSGAP
AAAPEPAAPAPAAPAAAVSGASGQ

Sequences:

>Translated_184_residues
MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKSAGVTVGRVGAIGFDSNSYQA
LVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDSEMLKAGDTISMTQSAIVLENLIGQFLYNKAADSGAAKSGAP
AAAPEPAAPAPAAPAAAVSGASGQ
>Mature_184_residues
MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKSAGVTVGRVGAIGFDSNSYQA
LVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDSEMLKAGDTISMTQSAIVLENLIGQFLYNKAADSGAAKSGAP
AAAPEPAAPAPAAPAAAVSGASGQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=170, Percent_Identity=48.2352941176471, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18885; Mature: 18885

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEECCCCCEEEECCHHH
AGVTVGRVGAIGFDSNSYQALVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDSE
CCEEEECEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCHH
MLKAGDTISMTQSAIVLENLIGQFLYNKAADSGAAKSGAPAAAPEPAAPAPAAPAAAVSG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
ASGQ
CCCC
>Mature Secondary Structure
MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECEEEEEECCCCCEEEECCHHH
AGVTVGRVGAIGFDSNSYQALVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDSE
CCEEEECEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCHH
MLKAGDTISMTQSAIVLENLIGQFLYNKAADSGAAKSGAPAAAPEPAAPAPAAPAAAVSG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
ASGQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]