| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is mlaE [H]
Identifier: 186477517
GI number: 186477517
Start: 3118366
End: 3119133
Strand: Reverse
Name: mlaE [H]
Synonym: Bphy_2769
Alternate gene names: 186477517
Gene position: 3119133-3118366 (Counterclockwise)
Preceding gene: 186477518
Following gene: 186477516
Centisome position: 89.65
GC content: 63.67
Gene sequence:
>768_bases ATGATCAGCACCATCGGTCGTTCCGTCATCTGCGGGCTCGGGCAGACGGGGTATGCGGCGCGCATGTTCTTGCGCCTCGT GCTGGAATTTTTTCCTCTGCTGCGCCGTCCGCGTCTCGTTACGAAGCAGATCCACTTCGTCGGTAACTATTCGCTGGTGA TCATCGCGGTGTCGGGGCTGTTCGTCGGCTTCGTGCTCGGACTGCAAGGCTATTACACGCTCAACCGCTACGGCTCCGAA CAGGCGCTGGGCTTGCTGGTCGCGCTGTCGCTGGTGCGCGAACTCGGGCCCGTGGTGACGGCGCTGCTGTTCGCCGGCCG CGCGGGCACGTCGCTCACGGCCGAGATCGGCCTGATGAAGGCGGGCGAACAACTCACGGCAATGGAAATGATGGCCGTCG ACCCGTTGAAGGTGGTCGTCGCACCGCGCATGTGGGCGGGCATCATCGCGATGCCGGTTCTCGCCGCCATCTTCAGCGCA GTGGGCGTGATCGGCGGCTATATCGTGGGCGTCCTGATGATCGGCGTCGACGCTGGTGCGTTCTGGTCGCAGATGCAGGG CGGTGTCGATGCTTATCGTGACGTCGGCAACGGCGTGATCAAAAGCATCGTGTTCGGCTTCGCGGTGACGTTCATCGCGC TCTACCAGGGCTACGAAGCGAAGCCCACGCCGGAAGGCGTGTCGCGCGCGACGACGAAGACGGTCGTCTACGCATCGCTC GCCGTGCTCGGTCTGGATTTCCTGCTGACCGCGCTGATGTTCAGCTAG
Upstream 100 bases:
>100_bases TGCGCCAGTTCATCGACGGCACGCCCGATGGCCCGTTCAAATTTCACTATCCGAGCAACACGTCGCTGGCGGCGGACTTC GGCATCGGCGGAGGCCGCGC
Downstream 100 bases:
>100_bases GCGGCGCCGCACCGAACCCTGCGCGCCGCGCCGCGCAGGCAGTGCGCCGCTGCGGCATAGATTCTCTTTGGGATGACGAT GAAAAAAACTGCTCTCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSA VGVIGGYIVGVLMIGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTKTVVYASL AVLGLDFLLTALMFS
Sequences:
>Translated_255_residues MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSA VGVIGGYIVGVLMIGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTKTVVYASL AVLGLDFLLTALMFS >Mature_255_residues MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGLFVGFVLGLQGYYTLNRYGSE QALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMKAGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSA VGVIGGYIVGVLMIGVDAGAFWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTKTVVYASL AVLGLDFLLTALMFS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=253, Percent_Identity=56.1264822134387, Blast_Score=276, Evalue=1e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27087; Mature: 27087
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLMIGVDAGA CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTKTVVYASL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC >Mature Secondary Structure MISTIGRSVICGLGQTGYAARMFLRLVLEFFPLLRRPRLVTKQIHFVGNYSLVIIAVSGL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH FVGFVLGLQGYYTLNRYGSEQALGLLVALSLVRELGPVVTALLFAGRAGTSLTAEIGLMK HHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH AGEQLTAMEMMAVDPLKVVVAPRMWAGIIAMPVLAAIFSAVGVIGGYIVGVLMIGVDAGA CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FWSQMQGGVDAYRDVGNGVIKSIVFGFAVTFIALYQGYEAKPTPEGVSRATTKTVVYASL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AVLGLDFLLTALMFS HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]