| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is mlaA [H]
Identifier: 186477515
GI number: 186477515
Start: 3116772
End: 3117719
Strand: Reverse
Name: mlaA [H]
Synonym: Bphy_2767
Alternate gene names: 186477515
Gene position: 3117719-3116772 (Counterclockwise)
Preceding gene: 186477516
Following gene: 186477514
Centisome position: 89.61
GC content: 63.29
Gene sequence:
>948_bases ATGATGACGACACGCTTACGTGTCGCGGGGATCGCGCTGGCTGTGGCAACGTTTGCCGGTTGTGCAACCGTTCAGAACCC GACGAAAGAAGACCCCATCGAGGGCTTTAACCGTACGATCTTCACGTTCAACGACACCGTCGATAAATACGCGCTGAAGC CCGTCGCGAAGGGCTACGTGTTTGTCACGCCGCAGCCGGTGCGCGATAGCGTGACGAACTTCTTTTCGAACATCGGCGAC GTGTACATCGCCGCGAACAACCTGCTGCAACTGAAGATCGCCGACGGGGTGTCGGACATCATGCGGATCGTGATCAACAC GATCTTCGGTGTCGGCGGACTGTTCGATGTCGCGACGATCGCGAAGCTGCCGAAGCACGACAACGACCTCGGTCTGACGC TGGGTCACTATGGCGTGCCGCCGGGGCCGTATCTGGTGCTGCCACTGTTTGGGCCGAGCACGGTGCGCGACGGCGTCGGC ATGGTCGGCAACTACTTCATCAACCCGCTCACGTATGTGCAGCCGGACAGCTTGAGCTGGGCGCTGTATGGCCTGAACGT GGTCAACACGCGTGCGAACCTGCTGAGTGCGAGCGACGTGCTGGAAGGTGCAGCCCTCGACAAGTATTCGTTCGTGCGTA ACGCATATCTGCAACGCCGTCGCTATCTGCTGACGGGTGGCACTGCGTCGACGGCGCTGCCGGACTATGGCAGCGAAGCG CCGCTGCCGAAATACGAAGATGTCGACGGTGGCGCTGCCGCGACGCCCGCATCGCCGGCTGCGGCGTCGGCGCCCGAAGC GGCGTCGGGTGCGACGTCGAGCGGTGCAACGGGTGGCGCGGCGGGTGCTGCGCAACCGGCATCGGACACGAATGCACCGC CGACCGTTCCGGGCGGCCAGATCGTGCCCCCTGCGCACTTCGGCTACCCGTCGCTGAAACTGCGTTAA
Upstream 100 bases:
>100_bases TCCGGTGCACCCGCTGCGGCGCCCGAGCCTGCAGCACCGGCTCCCGCAGCGCCTGCTGCGGCCGTTTCGGGTGCATCCGG GCAATAAGGAGAGAACAACA
Downstream 100 bases:
>100_bases CGGCATGTCAAATGCGGGAAATGTATCTGTGTGCCGTAACACTCGGATACGAATCTCGCAGTTTCGGCGTGGATTGCGTC TGAACTCGCGTGATATTGTC
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MMTTRLRVAGIALAVATFAGCATVQNPTKEDPIEGFNRTIFTFNDTVDKYALKPVAKGYVFVTPQPVRDSVTNFFSNIGD VYIAANNLLQLKIADGVSDIMRIVINTIFGVGGLFDVATIAKLPKHDNDLGLTLGHYGVPPGPYLVLPLFGPSTVRDGVG MVGNYFINPLTYVQPDSLSWALYGLNVVNTRANLLSASDVLEGAALDKYSFVRNAYLQRRRYLLTGGTASTALPDYGSEA PLPKYEDVDGGAAATPASPAAASAPEAASGATSSGATGGAAGAAQPASDTNAPPTVPGGQIVPPAHFGYPSLKLR
Sequences:
>Translated_315_residues MMTTRLRVAGIALAVATFAGCATVQNPTKEDPIEGFNRTIFTFNDTVDKYALKPVAKGYVFVTPQPVRDSVTNFFSNIGD VYIAANNLLQLKIADGVSDIMRIVINTIFGVGGLFDVATIAKLPKHDNDLGLTLGHYGVPPGPYLVLPLFGPSTVRDGVG MVGNYFINPLTYVQPDSLSWALYGLNVVNTRANLLSASDVLEGAALDKYSFVRNAYLQRRRYLLTGGTASTALPDYGSEA PLPKYEDVDGGAAATPASPAAASAPEAASGATSSGATGGAAGAAQPASDTNAPPTVPGGQIVPPAHFGYPSLKLR >Mature_315_residues MMTTRLRVAGIALAVATFAGCATVQNPTKEDPIEGFNRTIFTFNDTVDKYALKPVAKGYVFVTPQPVRDSVTNFFSNIGD VYIAANNLLQLKIADGVSDIMRIVINTIFGVGGLFDVATIAKLPKHDNDLGLTLGHYGVPPGPYLVLPLFGPSTVRDGVG MVGNYFINPLTYVQPDSLSWALYGLNVVNTRANLLSASDVLEGAALDKYSFVRNAYLQRRRYLLTGGTASTALPDYGSEA PLPKYEDVDGGAAATPASPAAASAPEAASGATSSGATGGAAGAAQPASDTNAPPTVPGGQIVPPAHFGYPSLKLR
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=231, Percent_Identity=37.6623376623377, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 32855; Mature: 32855
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTRLRVAGIALAVATFAGCATVQNPTKEDPIEGFNRTIFTFNDTVDKYALKPVAKGYV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEE FVTPQPVRDSVTNFFSNIGDVYIAANNLLQLKIADGVSDIMRIVINTIFGVGGLFDVATI EECCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHH AKLPKHDNDLGLTLGHYGVPPGPYLVLPLFGPSTVRDGVGMVGNYFINPLTYVQPDSLSW HHCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCEE ALYGLNVVNTRANLLSASDVLEGAALDKYSFVRNAYLQRRRYLLTGGTASTALPDYGSEA EEEECEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCC PLPKYEDVDGGAAATPASPAAASAPEAASGATSSGATGGAAGAAQPASDTNAPPTVPGGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IVPPAHFGYPSLKLR CCCCCCCCCCCCEEC >Mature Secondary Structure MMTTRLRVAGIALAVATFAGCATVQNPTKEDPIEGFNRTIFTFNDTVDKYALKPVAKGYV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCEE FVTPQPVRDSVTNFFSNIGDVYIAANNLLQLKIADGVSDIMRIVINTIFGVGGLFDVATI EECCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHH AKLPKHDNDLGLTLGHYGVPPGPYLVLPLFGPSTVRDGVGMVGNYFINPLTYVQPDSLSW HHCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCEE ALYGLNVVNTRANLLSASDVLEGAALDKYSFVRNAYLQRRRYLLTGGTASTALPDYGSEA EEEECEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCC PLPKYEDVDGGAAATPASPAAASAPEAASGATSSGATGGAAGAAQPASDTNAPPTVPGGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IVPPAHFGYPSLKLR CCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]