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The map label for this gene is ydhM [C]

Identifier: 186477480

GI number: 186477480

Start: 3088495

End: 3089163

Strand: Direct

Name: ydhM [C]

Synonym: Bphy_2732

Alternate gene names: 186477480

Gene position: 3088495-3089163 (Clockwise)

Preceding gene: 186477477

Following gene: 186477481

Centisome position: 88.77

GC content: 63.08

Gene sequence:

>669_bases
ATGTCAAGGTGTCTTAACTTGAACCACGAGACCCTCATGGCACATTCCGACACCACCAAACCCGCGTCGAGCCGCCGTGC
GCAGACAGCGGGCTCCGACGCGCAGCAACATCTTCTGCGCGCGGCGGCCGACCTTTTCTACAAGGAAGGCGTGCGCGCAG
TGGGCGTCGATGCCGTCGTCGAGCGCGCGGGCGTCAACAAGATGAGCTTGTACCGGCAGTTCTCGTCAAAAGACGATCTC
GTGGTCGCGTACCTGGAACAGTCCGACGAGCACTTCTTCAGGCGGTTCGACGAAAGCCTCGCCAAACGTCCGGGCGAGCC
GAGGAAGCAGATCGTCCAGTATTTCGAGGATCTTGCCGGGCGAGCGTCGAAGGAGGACTATCGCGGCTGCCCGTTCGTCA
ATGTGTCGGCGGAGTTTCCGGACCCGTCGCACCCTGCGCGAGTCTGCGTGCTGAACAACAAGACAAAGCTGATGCAGCGT
CTGAACGAACTCTGCACGCAAGCCGGCGCGCGCGATCCGGCCGAGCTTGCGAACGGCCTCGCGCTGTTGATCGAAGGCGT
GTATGCGTCGAGTCAGACGTACGGCCCGGGTTGCGGGCCGATCAAGGTGGCGCCGCGCGTCGCGGAACAACTTGTCGCGC
AGGCGTGCGGGGCAGCCTCGGTAAAATAG

Upstream 100 bases:

>100_bases
TGTCGCGATGTGAGCCGCAGCTGATTCTTACCACTTTCGTAGAAGACTTGTGACTGACCTGTCACAATCGGTCTTGCGAT
GTTAGTTACCGATCGGTAAC

Downstream 100 bases:

>100_bases
CGGTTTTGCTTTCGCACTGGCACCGTCATGTCTTCGCCCTCCTACGCTTCCCATGACACCATTCTGGACGCCACGCGCCA
CTGGCTAACGCGCGCCGTGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcription Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Methionine And Cysteine Biosynthesis Regulator; Transcriptional Regulator Tetr-Like Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSRCLNLNHETLMAHSDTTKPASSRRAQTAGSDAQQHLLRAAADLFYKEGVRAVGVDAVVERAGVNKMSLYRQFSSKDDL
VVAYLEQSDEHFFRRFDESLAKRPGEPRKQIVQYFEDLAGRASKEDYRGCPFVNVSAEFPDPSHPARVCVLNNKTKLMQR
LNELCTQAGARDPAELANGLALLIEGVYASSQTYGPGCGPIKVAPRVAEQLVAQACGAASVK

Sequences:

>Translated_222_residues
MSRCLNLNHETLMAHSDTTKPASSRRAQTAGSDAQQHLLRAAADLFYKEGVRAVGVDAVVERAGVNKMSLYRQFSSKDDL
VVAYLEQSDEHFFRRFDESLAKRPGEPRKQIVQYFEDLAGRASKEDYRGCPFVNVSAEFPDPSHPARVCVLNNKTKLMQR
LNELCTQAGARDPAELANGLALLIEGVYASSQTYGPGCGPIKVAPRVAEQLVAQACGAASVK
>Mature_221_residues
SRCLNLNHETLMAHSDTTKPASSRRAQTAGSDAQQHLLRAAADLFYKEGVRAVGVDAVVERAGVNKMSLYRQFSSKDDLV
VAYLEQSDEHFFRRFDESLAKRPGEPRKQIVQYFEDLAGRASKEDYRGCPFVNVSAEFPDPSHPARVCVLNNKTKLMQRL
NELCTQAGARDPAELANGLALLIEGVYASSQTYGPGCGPIKVAPRVAEQLVAQACGAASVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24288; Mature: 24156

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRCLNLNHETLMAHSDTTKPASSRRAQTAGSDAQQHLLRAAADLFYKEGVRAVGVDAVV
CCCCCCCCHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERAGVNKMSLYRQFSSKDDLVVAYLEQSDEHFFRRFDESLAKRPGEPRKQIVQYFEDLAG
HHHCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
RASKEDYRGCPFVNVSAEFPDPSHPARVCVLNNKTKLMQRLNELCTQAGARDPAELANGL
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLIEGVYASSQTYGPGCGPIKVAPRVAEQLVAQACGAASVK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRCLNLNHETLMAHSDTTKPASSRRAQTAGSDAQQHLLRAAADLFYKEGVRAVGVDAVV
CCCCCCCHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ERAGVNKMSLYRQFSSKDDLVVAYLEQSDEHFFRRFDESLAKRPGEPRKQIVQYFEDLAG
HHHCCHHHHHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
RASKEDYRGCPFVNVSAEFPDPSHPARVCVLNNKTKLMQRLNELCTQAGARDPAELANGL
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLIEGVYASSQTYGPGCGPIKVAPRVAEQLVAQACGAASVK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA