Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yyaJ [H]

Identifier: 186477477

GI number: 186477477

Start: 3084759

End: 3086228

Strand: Direct

Name: yyaJ [H]

Synonym: Bphy_2729

Alternate gene names: 186477477

Gene position: 3084759-3086228 (Clockwise)

Preceding gene: 186477475

Following gene: 186477480

Centisome position: 88.66

GC content: 65.37

Gene sequence:

>1470_bases
ATGCAGGAACCCTCTACTGCCACGGTCGGCGCCGAGCCGTCCGTCACCGTCGAGACCGATCTGCCATCGCGCCTCGATCG
CTTGCCTTGGGGCCGCTTCCACTCGCTGATCGTGGTTGCGCTCGGCGTGACATGGCTGCTCGACGGGCTGGAAGTGACGC
TCGCGGGATCCGTCGCAAGCGCCTTGAAGTCGAGCGACGTGCTGCACTTTTCGAACGCGGACGTGGGGCTCGCGGGCAGC
GCATATATCGCGGGCGCGGTGCTAGGCGCGCTCGGCTTCGGCTGGCTGACCGACCGGCTCGGACGCCGCAAGCTGTTCTT
CATTACGCTCGCGCTCTATCTGGCGGCGACGGCGGCGACGGCATTCTCGTGGAATCTCGCAAGCTTTCTGTTGTTCCGCT
TTTTGACGGGCGCGGGCATCGGCGGCGAATACACCGCAATCAATTCGACCATCCAGGAATTCACGCCCGCCCGCGTGCGT
GGCCACACCGATCTTGCCATCAATGGCACCTTCTGGATCGGCGCAGCACTCGGCGCGATCGGTTCGCTGGTGCTGCTCGA
TCCGCATCTGTTCCACGGCGACTGGGGCTGGCGCGCGTGCTTCTTCATTGGGGCGGCGCTCGCGCTGGCGATCCTGCCGA
TGCGCGTCTGGATCCCCGAAAGCCCGCGCTGGCTGCTCACGCACGGCGAAGAAAAGGAAGCGCGCCGGATCGTCGAAGGT
ATCGAGGCGCGCTTCCGCGCGCAAGACCACGCCCTTGCCGACGACGCGCTCAAGCGTCTGCGCCTGCGTGCCCGCGAGCG
CACGACGTTGCGCGAGGTCTTCCACACGCTGTTCGTGTTGCATCGGCGCCGCGCGCTGGTCGGGCTGTCGCTGATGACGG
CACAGGCGTTCTTCTACAACGCGATCTTCTTCACCTACGCGCTCGTCCTGACGGACTTCTATCACGTGCCCGGCGACCAC
ATCGGCTGGTATATCCTGCCGTTCGCGCTCGGGAATTTCGCCGGGCCGCTTTTGATCGGCAGGCTGTTCGATGTGATCGG
CCGACGCAAGATGATCGCCGCGACCTACGCAATCTCCGCGATCCTGCTGACCTTGAGCGGCTACCTGTTCGAGCAGGCGT
TGCTCACCGTAACGACGCAAACGATCGCGTGGATGGTGATTTTCTTCTTCGCGTCGGCGGCGGCAAGCTCGGCGTATCTA
ACCGTCAGCGAATCGTTTCCGCTCGAAATCCGCGCGCTCGCGATCGCGGTGTTTTACGCGTTCGGCACGGCGCTGGGCGG
TATCGCGGGGCCGGCGTTCTTCGGCCGTCTGATTGACACGCAGCAGCGCAGCGAAGTGTTCTCCGGCTATCTGGTCGGCT
CGGCGCTGATGCTGGCCGCGGCGCTCATCGGGGCGATCTGGGGCGTCGACGCCGAGCGCCGTTCGCTCGAGACGGTCGCG
GCGCCGTTGTCAGCCGTCGAGGATCAGTAA

Upstream 100 bases:

>100_bases
GACAGGATACGCCCTTCGCCCGGCGCTCACAGCAGCTTCCGAAAATGTGCCGGCTGTCCGGCTTACCTGTCAGCATTGGC
TTGCCCATTCAGGAGACCCA

Downstream 100 bases:

>100_bases
GGCCGCAGCACCACACAAAAAAACGGCCCAGATGGGCCGCGTTGCGTCGTCCTGCAAGCAAGAACTGAAGATCGCTCAGA
ACGCCTTGTTCCACGCGCCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS
AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR
GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG
IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH
IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL
TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA
APLSAVEDQ

Sequences:

>Translated_489_residues
MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS
AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR
GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG
IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH
IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL
TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA
APLSAVEDQ
>Mature_489_residues
MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVASALKSSDVLHFSNADVGLAGS
AYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAATAFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVR
GHTDLAINGTFWIGAALGAIGSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG
IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYNAIFFTYALVLTDFYHVPGDH
IGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISAILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYL
TVSESFPLEIRALAIAVFYAFGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA
APLSAVEDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI7662270, Length=238, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI90669191, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI24497497, Length=369, Percent_Identity=27.3712737127371, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI296080721, Length=293, Percent_Identity=25.5972696245734, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI296080719, Length=270, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI24497499, Length=270, Percent_Identity=25.9259259259259, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI4506999, Length=274, Percent_Identity=27.7372262773723, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI23510410, Length=274, Percent_Identity=27.007299270073, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI296080734, Length=261, Percent_Identity=25.2873563218391, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI213021148, Length=257, Percent_Identity=24.124513618677, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI216548223, Length=232, Percent_Identity=28.448275862069, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI203098995, Length=312, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI24497478, Length=351, Percent_Identity=23.9316239316239, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI24497480, Length=351, Percent_Identity=23.9316239316239, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1786229, Length=427, Percent_Identity=27.4004683840749, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788074, Length=439, Percent_Identity=25.7403189066059, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788068, Length=483, Percent_Identity=25.4658385093168, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87082159, Length=263, Percent_Identity=28.5171102661597, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1789207, Length=403, Percent_Identity=25.3101736972705, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1790550, Length=418, Percent_Identity=23.9234449760766, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87082231, Length=231, Percent_Identity=29.004329004329, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789312, Length=416, Percent_Identity=24.0384615384615, Blast_Score=65, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193202825, Length=296, Percent_Identity=23.9864864864865, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71986689, Length=296, Percent_Identity=23.9864864864865, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564663, Length=443, Percent_Identity=25.5079006772009, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17565976, Length=275, Percent_Identity=25.4545454545455, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565978, Length=299, Percent_Identity=23.4113712374582, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI212645980, Length=380, Percent_Identity=24.2105263157895, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323653, Length=376, Percent_Identity=24.7340425531915, Blast_Score=80, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6323512, Length=406, Percent_Identity=24.8768472906404, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320745, Length=303, Percent_Identity=25.7425742574257, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320595, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321100, Length=379, Percent_Identity=25.3298153034301, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320766, Length=380, Percent_Identity=23.9473684210526, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24652795, Length=361, Percent_Identity=25.4847645429363, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24640198, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24640196, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24640200, Length=327, Percent_Identity=23.5474006116208, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24652793, Length=361, Percent_Identity=25.4847645429363, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI19922874, Length=463, Percent_Identity=23.9740820734341, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221330907, Length=365, Percent_Identity=24.1095890410959, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI62484254, Length=386, Percent_Identity=23.3160621761658, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 53156; Mature: 53156

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVAS
CCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
ALKSSDVLHFSNADVGLAGSAYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAAT
HHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVRGHTDLAINGTFWIGAALGAI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHHHH
GSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG
HHHHEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHH
IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFFTYALVLTDFYHVPGDHIGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYLTVSESFPLEIRALAIAVFYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
FGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
APLSAVEDQ
HHHHHHCCC
>Mature Secondary Structure
MQEPSTATVGAEPSVTVETDLPSRLDRLPWGRFHSLIVVALGVTWLLDGLEVTLAGSVAS
CCCCCCCCCCCCCCEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
ALKSSDVLHFSNADVGLAGSAYIAGAVLGALGFGWLTDRLGRRKLFFITLALYLAATAAT
HHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AFSWNLASFLLFRFLTGAGIGGEYTAINSTIQEFTPARVRGHTDLAINGTFWIGAALGAI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCEEEECHHHHHHHHHHH
GSLVLLDPHLFHGDWGWRACFFIGAALALAILPMRVWIPESPRWLLTHGEEKEARRIVEG
HHHHEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHH
IEARFRAQDHALADDALKRLRLRARERTTLREVFHTLFVLHRRRALVGLSLMTAQAFFYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFFTYALVLTDFYHVPGDHIGWYILPFALGNFAGPLLIGRLFDVIGRRKMIAATYAISA
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ILLTLSGYLFEQALLTVTTQTIAWMVIFFFASAAASSAYLTVSESFPLEIRALAIAVFYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
FGTALGGIAGPAFFGRLIDTQQRSEVFSGYLVGSALMLAAALIGAIWGVDAERRSLETVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
APLSAVEDQ
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 8011666; 9384377 [H]