| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477481
Identifier: 186477481
GI number: 186477481
Start: 3089191
End: 3089760
Strand: Direct
Name: 186477481
Synonym: Bphy_2733
Alternate gene names: NA
Gene position: 3089191-3089760 (Clockwise)
Preceding gene: 186477480
Following gene: 186477483
Centisome position: 88.79
GC content: 58.95
Gene sequence:
>570_bases ATGTCTTCGCCCTCCTACGCTTCCCATGACACCATTCTGGACGCCACGCGCCACTGGCTAACGCGCGCCGTGATCGGACT TAACCTGTGTCCTTTCGCGAAGGCGGTGCACGTGAAGAACCAGATTCGCTATGCAATCAGCGAAGCTGCCAACATGGAAG GCGCATTAACCGATCTGGAGACCGAACTTCGCACGCTCGCGGAATCCGATCCCGCCGAGATCGACACGACGCTGCTGATC ATCCCGCACGCGCTCGGCGATTTTCTCGAATACAACGACTGCCTGTTCTTCGCGGAACGAATGCTAAAGCAGATGCGCCT GGAAGGCACACTGCAAATCGCGAGCTTCCACCCGCGCTACCAGTTCGAAGGCAACGAACCGGACGATATCGAAAACTACA CGAATCGCGCACCCTACCCGATTCTGCATCTGCTGCGCGAAGCGAGCATCGAACGCGCGGTCAACGCGTTTCCCGACGCC GCCGACATCTACGAACGAAACGAAGCAACGATGCGTCGTCTCGGACGGGAAGGCTGGCGAGAATGGATGAGCGAGCCCGC CGGAGACTGA
Upstream 100 bases:
>100_bases GCCGATCAAGGTGGCGCCGCGCGTCGCGGAACAACTTGTCGCGCAGGCGTGCGGGGCAGCCTCGGTAAAATAGCGGTTTT GCTTTCGCACTGGCACCGTC
Downstream 100 bases:
>100_bases CCGGGCCGCGCGCTGTGCCCTCTCAAGCCTCCGCGTAGAAGCGCTCGCGCAACTCCGTGATGCCGAGCGTTTCCAGCACT TCACTGAGCCGCTCGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSSPSYASHDTILDATRHWLTRAVIGLNLCPFAKAVHVKNQIRYAISEAANMEGALTDLETELRTLAESDPAEIDTTLLI IPHALGDFLEYNDCLFFAERMLKQMRLEGTLQIASFHPRYQFEGNEPDDIENYTNRAPYPILHLLREASIERAVNAFPDA ADIYERNEATMRRLGREGWREWMSEPAGD
Sequences:
>Translated_189_residues MSSPSYASHDTILDATRHWLTRAVIGLNLCPFAKAVHVKNQIRYAISEAANMEGALTDLETELRTLAESDPAEIDTTLLI IPHALGDFLEYNDCLFFAERMLKQMRLEGTLQIASFHPRYQFEGNEPDDIENYTNRAPYPILHLLREASIERAVNAFPDA ADIYERNEATMRRLGREGWREWMSEPAGD >Mature_188_residues SSPSYASHDTILDATRHWLTRAVIGLNLCPFAKAVHVKNQIRYAISEAANMEGALTDLETELRTLAESDPAEIDTTLLII PHALGDFLEYNDCLFFAERMLKQMRLEGTLQIASFHPRYQFEGNEPDDIENYTNRAPYPILHLLREASIERAVNAFPDAA DIYERNEATMRRLGREGWREWMSEPAGD
Specific function: Unknown
COG id: COG3310
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21571; Mature: 21440
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSYASHDTILDATRHWLTRAVIGLNLCPFAKAVHVKNQIRYAISEAANMEGALTDLE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TELRTLAESDPAEIDTTLLIIPHALGDFLEYNDCLFFAERMLKQMRLEGTLQIASFHPRY HHHHHHHCCCCCHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCE QFEGNEPDDIENYTNRAPYPILHLLREASIERAVNAFPDAADIYERNEATMRRLGREGWR EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH EWMSEPAGD HHHCCCCCC >Mature Secondary Structure SSPSYASHDTILDATRHWLTRAVIGLNLCPFAKAVHVKNQIRYAISEAANMEGALTDLE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TELRTLAESDPAEIDTTLLIIPHALGDFLEYNDCLFFAERMLKQMRLEGTLQIASFHPRY HHHHHHHCCCCCHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCE QFEGNEPDDIENYTNRAPYPILHLLREASIERAVNAFPDAADIYERNEATMRRLGREGWR EECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH EWMSEPAGD HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA