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The map label for this gene is yecD [C]

Identifier: 186477464

GI number: 186477464

Start: 3071748

End: 3072299

Strand: Reverse

Name: yecD [C]

Synonym: Bphy_2716

Alternate gene names: 186477464

Gene position: 3072299-3071748 (Counterclockwise)

Preceding gene: 186477465

Following gene: 186477463

Centisome position: 88.31

GC content: 61.23

Gene sequence:

>552_bases
ATGTCCCGGGTTGCCATAATCGTGATCGACGTTCAGCAGATGTTTTTCAGCGGTCCGTCACCTGCATATCGCAGCGAGGC
CGTGATCGACGGCATCAACCGGCTTACGTCGGCTGCGCGCAAAGCAAACGCGCGTGTCTTTTTCGTGCAGCACGAGAGCG
GTGCGAGCGGACCGCTCGCACGCGGCAGCGACCCGTGGCAGTTGCCCGTGGCGCTTGTTCGCGAGCCATCGGATGCGTCC
ATCTACAAGATCGTCGGCGATTCGTTCCATGAGACGCCGCTCGCGGATCAGCTTGGTCAAAGCGATATCGATAGCGTGCT
GATATGCGGCTACGCGTCGGAGTTCTGCGTGAACGCCACCGCGCGCCGGGCCGAACTGCTCGGCCTGCGCACGACGGTCG
TCGCCGACCTGCACACGACGCAAGACAAGCCGCATCTCACGGCCGACAAGATCGTCGAGCACCAGAATTTCGTCTGGTCC
AATTCGTCAATGACGGGCAAGGGTGTCAAGGTGCGCCCTCTCGCTGACATTCTGCAAACGGAGTTCGCATGA

Upstream 100 bases:

>100_bases
CGGTATGAGGCCGCGCTGACGAGCCGCCGCGAAACGGCGGCTCGCTCGATGCTGCCAGCTTTGCGGCAGGAAGAATCGAC
CAATAAATAGCGAGGCTCGC

Downstream 100 bases:

>100_bases
GCATCAAGGCAGTCGTGTTCGACTTCGGCGGCGTGCTGATCGACTGGAGCCCGCAGTATCTGTATCGTCAGCTGATTCCC
GACGACGCCGAACGCGCATG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase; Amidase; Acetyltransferase GNAT Family; Amidase Nicotinamidase Family; 2 3-Dihydro-2 3-Dihydroxybenzoate Synthetase; Isochorismatase Hydrolase Protein; Acetyltransferase; Isochorismatase Protein; Hydrolase; Isochorismatase Superfamily Hydrolase; Isochorismatase-Like Protein; Nicotinamidase-Related Amidase; Streptothricin Hydrolase; Pyrimidine Utilization Protein B

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSRVAIIVIDVQQMFFSGPSPAYRSEAVIDGINRLTSAARKANARVFFVQHESGASGPLARGSDPWQLPVALVREPSDAS
IYKIVGDSFHETPLADQLGQSDIDSVLICGYASEFCVNATARRAELLGLRTTVVADLHTTQDKPHLTADKIVEHQNFVWS
NSSMTGKGVKVRPLADILQTEFA

Sequences:

>Translated_183_residues
MSRVAIIVIDVQQMFFSGPSPAYRSEAVIDGINRLTSAARKANARVFFVQHESGASGPLARGSDPWQLPVALVREPSDAS
IYKIVGDSFHETPLADQLGQSDIDSVLICGYASEFCVNATARRAELLGLRTTVVADLHTTQDKPHLTADKIVEHQNFVWS
NSSMTGKGVKVRPLADILQTEFA
>Mature_182_residues
SRVAIIVIDVQQMFFSGPSPAYRSEAVIDGINRLTSAARKANARVFFVQHESGASGPLARGSDPWQLPVALVREPSDASI
YKIVGDSFHETPLADQLGQSDIDSVLICGYASEFCVNATARRAELLGLRTTVVADLHTTQDKPHLTADKIVEHQNFVWSN
SSMTGKGVKVRPLADILQTEFA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19897; Mature: 19766

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVAIIVIDVQQMFFSGPSPAYRSEAVIDGINRLTSAARKANARVFFVQHESGASGPLA
CCCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
RGSDPWQLPVALVREPSDASIYKIVGDSFHETPLADQLGQSDIDSVLICGYASEFCVNAT
CCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHH
ARRAELLGLRTTVVADLHTTQDKPHLTADKIVEHQNFVWSNSSMTGKGVKVRPLADILQT
HHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCEEECHHHHHHHH
EFA
CCC
>Mature Secondary Structure 
SRVAIIVIDVQQMFFSGPSPAYRSEAVIDGINRLTSAARKANARVFFVQHESGASGPLA
CCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
RGSDPWQLPVALVREPSDASIYKIVGDSFHETPLADQLGQSDIDSVLICGYASEFCVNAT
CCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHHHH
ARRAELLGLRTTVVADLHTTQDKPHLTADKIVEHQNFVWSNSSMTGKGVKVRPLADILQT
HHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCEEECHHHHHHHH
EFA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA