| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477463
Identifier: 186477463
GI number: 186477463
Start: 3071128
End: 3071751
Strand: Reverse
Name: 186477463
Synonym: Bphy_2715
Alternate gene names: NA
Gene position: 3071751-3071128 (Counterclockwise)
Preceding gene: 186477464
Following gene: 186477455
Centisome position: 88.29
GC content: 62.34
Gene sequence:
>624_bases ATGAGCATCAAGGCAGTCGTGTTCGACTTCGGCGGCGTGCTGATCGACTGGAGCCCGCAGTATCTGTATCGTCAGCTGAT TCCCGACGACGCCGAACGCGCATGGTTCCTGTCGAACGTCTGCACGATGGACTGGGTGGTCCGCCAGGACGGCGGCCAGC CGATCGCGGAAGGCACGGCCGAACTGATCGCGAAATTTCCCGAACACGAAGCGCTGATCCGCGCGTTCTACGAGCGCTGG CATGAAATGGTGGCAGGCGTGCTCGACGACGGCGTGGCAACCGTTGAAAAGCTCGAGGACGCGAACGTGCCGCTGTTTGG CCTGACGAACTGGTCGGACGAGACCTTTCCGTATGCGTGGGAGCACTACCCTGTGCTGCGGCGCTTCAAGGACATCGTGG TGTCCGGCCGCGTGAAGATGGTCAAGCCGGATCCCGCCATCTTTGCCGAGATGCTGCGCCGGATTCGCGCGCATTTGCCG GACGTCGAAGCGCATGAACTCGTCTTTATCGACGACAACATCGCGAACGCGCGCGCCGCGACCGAACTCGGCTGGCACGG CGTACATCACACGAACGCCGCGCAGACGGAAGCAAAACTGCGCCAACTCGGGTTGCCTGTCTGA
Upstream 100 bases:
>100_bases AGATCGTCGAGCACCAGAATTTCGTCTGGTCCAATTCGTCAATGACGGGCAAGGGTGTCAAGGTGCGCCCTCTCGCTGAC ATTCTGCAAACGGAGTTCGC
Downstream 100 bases:
>100_bases GCCGGCGAAGGCCGCGCCCGGCGAGGGCGTTACTGTCCGAGCAGATTCTTCAGCGCGTTGCCCAATCCCTTTACCGTTTC TTCCGTGCCTTTCGCGACGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERW HEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLP DVEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV
Sequences:
>Translated_207_residues MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERW HEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLP DVEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV >Mature_206_residues SIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERWH EMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPD VEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23535; Mature: 23404
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTA CCCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH ELIAKFPEHEALIRAFYERWHEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAW HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH EHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPDVEAHELVFIDDNIANARAA HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH TELGWHGVHHTNAAQTEAKLRQLGLPV HHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTA CCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH ELIAKFPEHEALIRAFYERWHEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAW HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH EHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPDVEAHELVFIDDNIANARAA HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH TELGWHGVHHTNAAQTEAKLRQLGLPV HHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA