Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477463

Identifier: 186477463

GI number: 186477463

Start: 3071128

End: 3071751

Strand: Reverse

Name: 186477463

Synonym: Bphy_2715

Alternate gene names: NA

Gene position: 3071751-3071128 (Counterclockwise)

Preceding gene: 186477464

Following gene: 186477455

Centisome position: 88.29

GC content: 62.34

Gene sequence:

>624_bases
ATGAGCATCAAGGCAGTCGTGTTCGACTTCGGCGGCGTGCTGATCGACTGGAGCCCGCAGTATCTGTATCGTCAGCTGAT
TCCCGACGACGCCGAACGCGCATGGTTCCTGTCGAACGTCTGCACGATGGACTGGGTGGTCCGCCAGGACGGCGGCCAGC
CGATCGCGGAAGGCACGGCCGAACTGATCGCGAAATTTCCCGAACACGAAGCGCTGATCCGCGCGTTCTACGAGCGCTGG
CATGAAATGGTGGCAGGCGTGCTCGACGACGGCGTGGCAACCGTTGAAAAGCTCGAGGACGCGAACGTGCCGCTGTTTGG
CCTGACGAACTGGTCGGACGAGACCTTTCCGTATGCGTGGGAGCACTACCCTGTGCTGCGGCGCTTCAAGGACATCGTGG
TGTCCGGCCGCGTGAAGATGGTCAAGCCGGATCCCGCCATCTTTGCCGAGATGCTGCGCCGGATTCGCGCGCATTTGCCG
GACGTCGAAGCGCATGAACTCGTCTTTATCGACGACAACATCGCGAACGCGCGCGCCGCGACCGAACTCGGCTGGCACGG
CGTACATCACACGAACGCCGCGCAGACGGAAGCAAAACTGCGCCAACTCGGGTTGCCTGTCTGA

Upstream 100 bases:

>100_bases
AGATCGTCGAGCACCAGAATTTCGTCTGGTCCAATTCGTCAATGACGGGCAAGGGTGTCAAGGTGCGCCCTCTCGCTGAC
ATTCTGCAAACGGAGTTCGC

Downstream 100 bases:

>100_bases
GCCGGCGAAGGCCGCGCCCGGCGAGGGCGTTACTGTCCGAGCAGATTCTTCAGCGCGTTGCCCAATCCCTTTACCGTTTC
TTCCGTGCCTTTCGCGACGC

Product: HAD family hydrolase

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Superfamily Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERW
HEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLP
DVEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV

Sequences:

>Translated_207_residues
MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERW
HEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLP
DVEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV
>Mature_206_residues
SIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTAELIAKFPEHEALIRAFYERWH
EMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAWEHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPD
VEAHELVFIDDNIANARAATELGWHGVHHTNAAQTEAKLRQLGLPV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23535; Mature: 23404

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTA
CCCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH
ELIAKFPEHEALIRAFYERWHEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH
EHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPDVEAHELVFIDDNIANARAA
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
TELGWHGVHHTNAAQTEAKLRQLGLPV
HHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIKAVVFDFGGVLIDWSPQYLYRQLIPDDAERAWFLSNVCTMDWVVRQDGGQPIAEGTA
CCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHH
ELIAKFPEHEALIRAFYERWHEMVAGVLDDGVATVEKLEDANVPLFGLTNWSDETFPYAW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCH
EHYPVLRRFKDIVVSGRVKMVKPDPAIFAEMLRRIRAHLPDVEAHELVFIDDNIANARAA
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
TELGWHGVHHTNAAQTEAKLRQLGLPV
HHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA