| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477462
Identifier: 186477462
GI number: 186477462
Start: 3069956
End: 3071098
Strand: Direct
Name: 186477462
Synonym: Bphy_2714
Alternate gene names: NA
Gene position: 3069956-3071098 (Clockwise)
Preceding gene: 186477461
Following gene: 186477467
Centisome position: 88.24
GC content: 62.29
Gene sequence:
>1143_bases ATGGTGATGTCGAAGGGCAGCCGTGTGATGGCGGCCATCGCAGGTGCGATCGTGCTGCTCGTCGTGCTCGCGGCGATCGG ATTGTATTTCGTGCAACGCGAAGTGAAAGCACGCGTCGTCGACGCGCTCGCGCCCGTCGGCACGGCAGACCGCATCGATG TGGGCATTTCGGCGATCACGCTGCATCGCGTGAGGCTGACGGCGCCGCAAGACTGGCCAACGCCCGATGCCCTCACCGCC GACGAAATCACGATGACGCCCGACGTTCGCGATTACCTGTTCGCGCATCGCATGCATCTGCGGAGCGTCGTGGTTCGCGG CTTCAATCTCGCGCTCGTGCGCACCTCGAGCGGCAGACTGGAGATTCTGCCGAAGCTGCGTCAATCGATGAGCAAGCCTG CGCAACCGTCGAGCGGGGCAAGCGGCGCTGCAACGAACAAACCGCCGTTACCCGCCGAAAAACTCATCGATCACATCGCG TTCGCGGATGGCCGGTTCGTCTTCTACGACGAGACGATCAGCAAGCCGCCGTACAAGGTCGTCGTCAGCGACGCGAGCGC GAGCGTCGATCATATCCACCTGCCCGACCTCAGCGAGCCGACGGGCATTTCGATGAAAGGCGCGATCAAGGGTCCGTCGC ACACGGGCCGGGTGACGTTCGATGGCTGGATGACGATCGCCAGCAAGGACTCGAAGACGACCACGACGCTCAAAGGCGTC GACGTTGTCACGCTCGATCCCTATCTGCTGAAGAAGGCAGGCGCGAAGGCACAGGTGACGGGCGGCACGCTCGACCTCAA TCTGCAGGCCGCGGTGACGAGCTATCACATCCACGCGCCGGGCACGGTCATGCTGCATCATCTGCAACTGGCCGGGACGG ACGATCCGCTCGATACGTTCATGCAGATTCCGACGCGTGCCGCCGTCGCCGCGCTGAAAAAACATGGCGACGACATCACG CTGCACTTCACGATCGACGGCAACTTACGCGATCCGAAGTTCAAGCTGAACGAAAGCGTAATGACGGAGTTGCGCGCGAA CTTCGCGAAGGCGCTGGGTGTCAGCGCCGAGGGCGTCGCGAAAGGCACGGAAGAAACGGTAAAGGGATTGGGCAACGCGC TGAAGAATCTGCTCGGACAGTAA
Upstream 100 bases:
>100_bases TTCTGCCTGCGCCGCGCCTCGCGTGCACCCGCATGCACCATGCGCGGCATTCCGCGACACATAACCCGAACCACGGCCAG AGCAAGGACGAGGAGGTGGC
Downstream 100 bases:
>100_bases CGCCCTCGCCGGGCGCGGCCTTCGCCGGCTCAGACAGGCAACCCGAGTTGGCGCAGTTTTGCTTCCGTCTGCGCGGCGTT CGTGTGATGTACGCCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MVMSKGSRVMAAIAGAIVLLVVLAAIGLYFVQREVKARVVDALAPVGTADRIDVGISAITLHRVRLTAPQDWPTPDALTA DEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSGRLEILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIA FADGRFVFYDETISKPPYKVVVSDASASVDHIHLPDLSEPTGISMKGAIKGPSHTGRVTFDGWMTIASKDSKTTTTLKGV DVVTLDPYLLKKAGAKAQVTGGTLDLNLQAAVTSYHIHAPGTVMLHHLQLAGTDDPLDTFMQIPTRAAVAALKKHGDDIT LHFTIDGNLRDPKFKLNESVMTELRANFAKALGVSAEGVAKGTEETVKGLGNALKNLLGQ
Sequences:
>Translated_380_residues MVMSKGSRVMAAIAGAIVLLVVLAAIGLYFVQREVKARVVDALAPVGTADRIDVGISAITLHRVRLTAPQDWPTPDALTA DEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSGRLEILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIA FADGRFVFYDETISKPPYKVVVSDASASVDHIHLPDLSEPTGISMKGAIKGPSHTGRVTFDGWMTIASKDSKTTTTLKGV DVVTLDPYLLKKAGAKAQVTGGTLDLNLQAAVTSYHIHAPGTVMLHHLQLAGTDDPLDTFMQIPTRAAVAALKKHGDDIT LHFTIDGNLRDPKFKLNESVMTELRANFAKALGVSAEGVAKGTEETVKGLGNALKNLLGQ >Mature_380_residues MVMSKGSRVMAAIAGAIVLLVVLAAIGLYFVQREVKARVVDALAPVGTADRIDVGISAITLHRVRLTAPQDWPTPDALTA DEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSGRLEILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIA FADGRFVFYDETISKPPYKVVVSDASASVDHIHLPDLSEPTGISMKGAIKGPSHTGRVTFDGWMTIASKDSKTTTTLKGV DVVTLDPYLLKKAGAKAQVTGGTLDLNLQAAVTSYHIHAPGTVMLHHLQLAGTDDPLDTFMQIPTRAAVAALKKHGDDIT LHFTIDGNLRDPKFKLNESVMTELRANFAKALGVSAEGVAKGTEETVKGLGNALKNLLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40586; Mature: 40586
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSKGSRVMAAIAGAIVLLVVLAAIGLYFVQREVKARVVDALAPVGTADRIDVGISAIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEE LHRVRLTAPQDWPTPDALTADEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSGRL EEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCE EILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIAFADGRFVFYDETISKPPYKV EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEE VVSDASASVDHIHLPDLSEPTGISMKGAIKGPSHTGRVTFDGWMTIASKDSKTTTTLKGV EEECCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCEEEEECEEEEECCCCCCEEEECCE DVVTLDPYLLKKAGAKAQVTGGTLDLNLQAAVTSYHIHAPGTVMLHHLQLAGTDDPLDTF EEEEECHHHHHHCCCCEEEECCEEEEEEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHH MQIPTRAAVAALKKHGDDITLHFTIDGNLRDPKFKLNESVMTELRANFAKALGVSAEGVA HHCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC KGTEETVKGLGNALKNLLGQ CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVMSKGSRVMAAIAGAIVLLVVLAAIGLYFVQREVKARVVDALAPVGTADRIDVGISAIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEE LHRVRLTAPQDWPTPDALTADEITMTPDVRDYLFAHRMHLRSVVVRGFNLALVRTSSGRL EEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCE EILPKLRQSMSKPAQPSSGASGAATNKPPLPAEKLIDHIAFADGRFVFYDETISKPPYKV EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEE VVSDASASVDHIHLPDLSEPTGISMKGAIKGPSHTGRVTFDGWMTIASKDSKTTTTLKGV EEECCCCCCCEEECCCCCCCCCCEEECCCCCCCCCCEEEEECEEEEECCCCCCEEEECCE DVVTLDPYLLKKAGAKAQVTGGTLDLNLQAAVTSYHIHAPGTVMLHHLQLAGTDDPLDTF EEEEECHHHHHHCCCCEEEECCEEEEEEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHH MQIPTRAAVAALKKHGDDITLHFTIDGNLRDPKFKLNESVMTELRANFAKALGVSAEGVA HHCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHC KGTEETVKGLGNALKNLLGQ CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA