Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yjjK [C]

Identifier: 186477461

GI number: 186477461

Start: 3068066

End: 3069733

Strand: Direct

Name: yjjK [C]

Synonym: Bphy_2713

Alternate gene names: 186477461

Gene position: 3068066-3069733 (Clockwise)

Preceding gene: 186477460

Following gene: 186477462

Centisome position: 88.18

GC content: 62.23

Gene sequence:

>1668_bases
ATGGCCCAATACGTCTTCACCATGAACCGGGTCGGCAAAATCGTGCCGCCCAAACGCCACATTCTGAAAGACATCTCGCT
GTCGTTTTTCCCCGGCGCGAAAATTGGTCTGCTCGGCCTGAACGGCTCGGGTAAGTCCACGCTGATCAAGATCATGGCCG
GCGTCGACAAGGATATCGAAGGCGAAGCCACGCCAATGCCGAACCTGAACATCGGCTATCTGCCGCAGGAGCCGCAGCTC
GATCCGCAAAAGACCGTGCGCGAAGCCGTCGAAGAAGGCCTCGGCGACGTGTTCCAGGCGCAGAAGAAGCTTGACGAAAT
CTACGCTGCCTACGCCGAGCCGGACGCCGATTTCGACGCGCTCGCCGCCGAGCAGGCGAAGTACGAGGCCATCCTCGCGA
CATCGGATGGCGGCAGCCCCGAACAGCAGCTCGAAGTCGCCGCCGACGCGCTGCGCCTGCCGCCGTGGGACGCGAAGATC
GAACACCTGTCGGGCGGCGAGAAGCGCCGCGTCGCACTGTGCAAGCTGCTGCTCGAAAAGCCCGACATGCTGCTGCTCGA
CGAACCGACCAACCACCTCGACGCCGAATCCGTCGAATGGCTGGAGCAGTTCCTCACGCGCTTCCCAGGCACCGTCGTCG
CCGTCACCCACGACCGCTACTTCCTCGACAACGCCGCCGAGTGGATTCTCGAACTCGACCGCGGCCACGGCATTCCGTGG
AAGGGTAACTACAGCAGCTGGCTCGACCAGAAGGAAGACCGCCTCAAGCAGGAAGAAGCGTCGGAATCCGCGCGTCAAAA
GGCGATCAAGAAGGAACTGGAATGGGTGCGGCAAAATCCGAAGGGCCGTCAGGCCAAGTCGAAGGCACGTATCGCGCGTT
TTGAGGAACTGAACAGCCAGGAGTACCAGAAGCGCAATGAAACCCAGGAAATCTTCATTCCCGTCGGCGACCGCCTCGGT
AATGAAGTGGTCGAGTTCAAGAATGTCAGCAAGTCGTACGGCGATCGCCTGCTGATCGACAACCTGAGCTTCAAGATTCC
GGCAGGCGCGATCGTCGGCATCATCGGCCCGAACGGCGCCGGCAAGTCGACGCTGTTCCGCATGCTCACAGGCAAGGAAC
AGCCCGATTCGGGCGAAATCGTTCAGGGTCCGACCGTGAAGCTCGCATACGTGGATCAGAGCCGCGACGCGCTCGACGGC
TCGAAGACCGTGTTCGAAGCAATCTCCGGCGGCGCAGACGTGCTGACGGTCGGCAAGTACGAGACGCCGTCGCGCGCCTA
CATCGGCCGCTTCAACTTCAAGGGCGGCGATCAGCAGAAGATCGTCGGCAATCTGTCGGGCGGCGAACGCGGCCGTCTTC
ATCTGGCGAAGACGCTGATCGCCGGCGGCAACATGCTGCTGCTCGACGAACCGTCAAACGACCTCGACGTCGAAACGCTG
CGCGCGCTCGAAGACGCCCTCCTCGAGTTCGCCGGCTCGGTGATGGTCATCTCGCACGACCGCTGGTTCCTCGACCGGAT
CGCGACGCATATCCTCGCCTTCGAAGGCGATTCTCAAGTCACCTTCTTCGACGGCAACTACCAGGAGTACGAAGCGGACA
AGCGCGCGCGCCTGGGCGAAGAAGCGGCGCGCCCCAAGCGTCTGCGCTACAAGCCGATCAGCCGCTAA

Upstream 100 bases:

>100_bases
AAGCCCCAGCGAGCTCAAGAAGTACAATGCCAGATCCGCCCGCCTCCAGCCGGCGCCAGCACGCGCAGTGCCAAACTCCA
ATTTCATCTGTCAAGCAAAA

Downstream 100 bases:

>100_bases
GCGTTCGTTGCATGGCCGTCCGCAATCGGACCGCGCTCGCGGTTCGATGCGAACGGCATAAGAGTTGCTCTCCATCCCTC
GCAGGATCGCATCCGGTCCA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAQYVFTMNRVGKIVPPKRHILKDISLSFFPGAKIGLLGLNGSGKSTLIKIMAGVDKDIEGEATPMPNLNIGYLPQEPQL
DPQKTVREAVEEGLGDVFQAQKKLDEIYAAYAEPDADFDALAAEQAKYEAILATSDGGSPEQQLEVAADALRLPPWDAKI
EHLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
KGNYSSWLDQKEDRLKQEEASESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLG
NEVVEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDSGEIVQGPTVKLAYVDQSRDALDG
SKTVFEAISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLIAGGNMLLLDEPSNDLDVETL
RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAARPKRLRYKPISR

Sequences:

>Translated_555_residues
MAQYVFTMNRVGKIVPPKRHILKDISLSFFPGAKIGLLGLNGSGKSTLIKIMAGVDKDIEGEATPMPNLNIGYLPQEPQL
DPQKTVREAVEEGLGDVFQAQKKLDEIYAAYAEPDADFDALAAEQAKYEAILATSDGGSPEQQLEVAADALRLPPWDAKI
EHLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
KGNYSSWLDQKEDRLKQEEASESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLG
NEVVEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDSGEIVQGPTVKLAYVDQSRDALDG
SKTVFEAISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLIAGGNMLLLDEPSNDLDVETL
RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAARPKRLRYKPISR
>Mature_554_residues
AQYVFTMNRVGKIVPPKRHILKDISLSFFPGAKIGLLGLNGSGKSTLIKIMAGVDKDIEGEATPMPNLNIGYLPQEPQLD
PQKTVREAVEEGLGDVFQAQKKLDEIYAAYAEPDADFDALAAEQAKYEAILATSDGGSPEQQLEVAADALRLPPWDAKIE
HLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPWK
GNYSSWLDQKEDRLKQEEASESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLGN
EVVEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMLTGKEQPDSGEIVQGPTVKLAYVDQSRDALDGS
KTVFEAISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLIAGGNMLLLDEPSNDLDVETLR
ALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAARPKRLRYKPISR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=532, Percent_Identity=28.3834586466165, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI27881506, Length=547, Percent_Identity=29.6160877513711, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI10947137, Length=547, Percent_Identity=29.6160877513711, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI69354671, Length=546, Percent_Identity=28.5714285714286, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI10947135, Length=546, Percent_Identity=28.5714285714286, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI30795238, Length=176, Percent_Identity=30.6818181818182, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI27881501, Length=176, Percent_Identity=30.6818181818182, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI21536376, Length=227, Percent_Identity=29.0748898678414, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI150417984, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=28.3018867924528, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI171184400, Length=204, Percent_Identity=29.9019607843137, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=72.2522522522522, Blast_Score=840, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=33.4630350194552, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI1789751, Length=519, Percent_Identity=32.5626204238921, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI1787041, Length=519, Percent_Identity=32.1772639691715, Blast_Score=239, Evalue=4e-64,
Organism=Escherichia coli, GI87081782, Length=584, Percent_Identity=25, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI48994943, Length=477, Percent_Identity=24.5283018867925, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=31.6062176165803, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788761, Length=198, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=32.1052631578947, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1786975, Length=397, Percent_Identity=25.4408060453401, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1786345, Length=226, Percent_Identity=29.646017699115, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87081791, Length=194, Percent_Identity=31.9587628865979, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1787164, Length=183, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=27.4038461538462, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=29.5238095238095, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787712, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=211, Percent_Identity=26.0663507109005, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=26.7942583732057, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=25.2631578947368, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=25.3275109170306, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787089, Length=242, Percent_Identity=28.099173553719, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=27.7573529411765, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=30.6818181818182, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=553, Percent_Identity=27.8481012658228, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI193208177, Length=229, Percent_Identity=28.82096069869, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=184, Percent_Identity=27.7173913043478, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=199, Percent_Identity=29.6482412060301, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=233, Percent_Identity=28.755364806867, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=248, Percent_Identity=29.0322580645161, Blast_Score=67, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=538, Percent_Identity=29.9256505576208, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6321121, Length=544, Percent_Identity=26.2867647058824, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6324314, Length=376, Percent_Identity=26.3297872340426, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=314, Percent_Identity=26.7515923566879, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=382, Percent_Identity=26.4397905759162, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=375, Percent_Identity=24.8, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323959, Length=200, Percent_Identity=29.5, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=28.256880733945, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=28.256880733945, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=28.5714285714286, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24641342, Length=545, Percent_Identity=28.6238532110092, Blast_Score=181, Evalue=2e-45,
Organism=Drosophila melanogaster, GI21357907, Length=200, Percent_Identity=30.5, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007184, Length=166, Percent_Identity=31.9277108433735, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI221500365, Length=166, Percent_Identity=31.9277108433735, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI85725262, Length=210, Percent_Identity=27.6190476190476, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666092, Length=207, Percent_Identity=28.5024154589372, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61729; Mature: 61597

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYVFTMNRVGKIVPPKRHILKDISLSFFPGAKIGLLGLNGSGKSTLIKIMAGVDKDIE
CCCEEEEHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEATPMPNLNIGYLPQEPQLDPQKTVREAVEEGLGDVFQAQKKLDEIYAAYAEPDADFDA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAAEQAKYEAILATSDGGSPEQQLEVAADALRLPPWDAKIEHLSGGEKRRVALCKLLLEK
HHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
KGNYSSWLDQKEDRLKQEEASESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH
EYQKRNETQEIFIPVGDRLGNEVVEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGA
HHHHCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEEECCCCC
GKSTLFRMLTGKEQPDSGEIVQGPTVKLAYVDQSRDALDGSKTVFEAISGGADVLTVGKY
CHHHHHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC
ETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLIAGGNMLLLDEPSNDLDVETL
CCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGE
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHCCH
EAARPKRLRYKPISR
HHCCCCCCCCCCCCC
>Mature Secondary Structure 
AQYVFTMNRVGKIVPPKRHILKDISLSFFPGAKIGLLGLNGSGKSTLIKIMAGVDKDIE
CCEEEEHHHCCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEATPMPNLNIGYLPQEPQLDPQKTVREAVEEGLGDVFQAQKKLDEIYAAYAEPDADFDA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAAEQAKYEAILATSDGGSPEQQLEVAADALRLPPWDAKIEHLSGGEKRRVALCKLLLEK
HHHHHCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVEWLEQFLTRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC
KGNYSSWLDQKEDRLKQEEASESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH
EYQKRNETQEIFIPVGDRLGNEVVEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGA
HHHHCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEEECCCCC
GKSTLFRMLTGKEQPDSGEIVQGPTVKLAYVDQSRDALDGSKTVFEAISGGADVLTVGKY
CHHHHHHHHCCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC
ETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLIAGGNMLLLDEPSNDLDVETL
CCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGE
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHCCH
EAARPKRLRYKPISR
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]