| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is prmA
Identifier: 186477379
GI number: 186477379
Start: 2969957
End: 2970859
Strand: Direct
Name: prmA
Synonym: Bphy_2631
Alternate gene names: 186477379
Gene position: 2969957-2970859 (Clockwise)
Preceding gene: 186477378
Following gene: 186477380
Centisome position: 85.36
GC content: 64.89
Gene sequence:
>903_bases ATGAGCTACCGGGAACTGGTCGTCGAACTCGCACGCGAGCACGCGGAAGCGTTGTCGGATGCGCTGCTCGAACTGGGCGC GCTGTCGGTGTCCGTCGAGGACGCGGACGCCGACACGCCCGACGAGCAGCCGCTGTTCGGCGAACCCGGGCTCACGCCGG AGCGCACCGCGTGGACCCACTCACGCGTGATCGCGCTGCTGGCGCCGGAACACGAGCCGGCCGTGCTGCTCGCGGCCGCC GCGAATGAACTCGGTCTCGCTGACACACCGTCGTTCAGCGTGCGCGCGGTCGAAGAACAGGACTGGGTGCGCCTCACGCA ATCCCAGTTCGATCCGATTCCGATCGGAGAACGCATCTGGGTCGTGCCATCGTGGCACGATGCGCCCGATCCGGACGCGC TCGTGCTCGAACTCGATCCGGGCCTCGCGTTCGGCACGGGCAGCCATCCCACGACAAGGCTGTGCATGGAATGGCTCGAA CAGTCCGTGCAAAAAGATCAGTCTGTACTCGACTACGGTTGTGGCTCGGGCATTCTCGCGATTCTCGCGAAGAAGTGCGG CGCAAATCCCGTCTTCGGCATCGACATTGATCCGCAAGCCGTCGAATCCGCCCGCCACAACAGCGAGCGCAATCGCGCCG AGATCACCTACGGTCTGCCCGCCGACTGCCCTGCCGGCGAGTTCGACATCGTCGTCGCGAACATCCTGTCGAATCCGCTG AAGCTGATGGCGTCGATGCTGTCGTCGAAGGTGAAGCCGGGCGGACGCATTGCGCTGTCAGGCATACTCGCGCGCCAGGC GGAAGAAGTGGCGAGCGTTTACCGGCAGTGGATCGACATCGCCGTGTGGCGCGAACACGAAGGCTGGGTGTGCCTTGCAG GTACGCGTCGCGAAAGCAATTAG
Upstream 100 bases:
>100_bases GATGCTCGACGCGAAGTTCGTCGAGGGCGGCACGAGCATCCATTACCTCGAAAACCGGCTGGCCGCGAAGCTGCAAGCCG CACCGGAAGAAGCGTAAGCA
Downstream 100 bases:
>100_bases AATAAGGCATATTTGCTTGCTTCCGGCCCCATTCGGCACCCTGGCCGCCAACCGGTCTTTCGGCTCGATATGCTTCTAGC GACACGCTGTCCCTTCTGCG
Product: 50S ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTHSRVIALLAPEHEPAVLLAAA ANELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIWVVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLE QSVQKDQSVLDYGCGSGILAILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPL KLMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN
Sequences:
>Translated_300_residues MSYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTHSRVIALLAPEHEPAVLLAAA ANELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIWVVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLE QSVQKDQSVLDYGCGSGILAILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPL KLMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN >Mature_299_residues SYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTHSRVIALLAPEHEPAVLLAAAA NELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIWVVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQ SVQKDQSVLDYGCGSGILAILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPLK LMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN
Specific function: Methylates ribosomal protein L11
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family
Homologues:
Organism=Escherichia coli, GI2367208, Length=300, Percent_Identity=41.6666666666667, Blast_Score=189, Evalue=3e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PRMA_BURP8 (B2JH19)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858849.1 - ProteinModelPortal: B2JH19 - SMR: B2JH19 - GeneID: 6244114 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2631 - HOGENOM: HBG584653 - OMA: EREEWCR - ProtClustDB: PRK00517 - GO: GO:0005737 - HAMAP: MF_00735 - InterPro: IPR010456 - InterPro: IPR004498 - TIGRFAMs: TIGR00406
Pfam domain/function: PF06325 PrmA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 32603; Mature: 32472
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTH CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH SRVIALLAPEHEPAVLLAAAANELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIW HEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCEEE VVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQSVQKDQSVLDYGCGSGILA EEECCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPL HHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHH KLMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCC >Mature Secondary Structure SYRELVVELAREHAEALSDALLELGALSVSVEDADADTPDEQPLFGEPGLTPERTAWTH CHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH SRVIALLAPEHEPAVLLAAAANELGLADTPSFSVRAVEEQDWVRLTQSQFDPIPIGERIW HEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCEEE VVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQSVQKDQSVLDYGCGSGILA EEECCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ILAKKCGANPVFGIDIDPQAVESARHNSERNRAEITYGLPADCPAGEFDIVVANILSNPL HHHHHHCCCCEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHH KLMASMLSSKVKPGGRIALSGILARQAEEVASVYRQWIDIAVWREHEGWVCLAGTRRESN HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA