Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477380

Identifier: 186477380

GI number: 186477380

Start: 2970929

End: 2972656

Strand: Direct

Name: 186477380

Synonym: Bphy_2632

Alternate gene names: NA

Gene position: 2970929-2972656 (Clockwise)

Preceding gene: 186477379

Following gene: 186477381

Centisome position: 85.39

GC content: 68.34

Gene sequence:

>1728_bases
ATGCTTCTAGCGACACGCTGTCCCTTCTGCGAAACCGTCTTCAGGCTCCAACGGGAGCAGCTCACGCTGCGCCGCGGGCT
CGTGCGTTGCGGCCACTGCAAACAGGTGTTCGACGCATCGAGCAGTCTGTTCGACGTAAGCGACGGCGTCAGCATCGACA
AGGCGAAGCCGGTAACAATCGACGATGTGACGGCCCACACGCTCGAAACGCTCGCGAATGGCGCTCAAACGCCGGCGCCG
GGCGCGCAGCCCGCGCCTGGCGAGCGCGTCGCCGCCGAGCCGAGGGTCGAACACGAAACGACGCGCGCTGAAGAAGCGCC
CGCGATCCACCACGTCGCCGCCGAGGTTGCGGAGCCACGCATCGAAGTGGGGGCGCCGCACCCAGCGGCTGCCGTCGAAA
CACCGTCGCCTGACATCGCTGAACCTTCCGTGCAATCCGGGCAGGCCGCGTCTCCCGATGCGGGCACCGAAGACGCGCCA
TCGGTGGACGCGCCCGACTTCCGCGCGGAAGCATGGAATCCGTGGGCGCCCGCCCCCGACGCGTCGATCGACGGGCGTCT
GCGCCACACCGCGTCGACGATCCCAATCAATCCCGTCACAATTCCGCGCTCCGCGCAACCGCCGATCACGCTCGAACTCA
CCGAATCCGAGCCGATGAATCTCGAGAAGGCAATCGCGCGCAAACCGGGCGAGCCGCACATCGAGGCGGGCGCCGAACAG
CGAGCGGGATCGGCCGTCGATACGCTCGCTGAACCGGGAATTGCCGAGCCCGCCGGAACGCCCGCTGCGTCGAAATCGGA
GCCCGCCTTCGAAGCAACGCCCGCGCGCGACCTCGCGCGGGACCTGCACGAACTGCCGACGCACGGGTGGCGCGCAGCGG
AGCCTCTGCGCGAGTCCGTCGAAACACATCCAGAGCAGGCGGAGCCGGGACGGGAAGCGCCGCTGCGCCCCGCCTTCGAC
AAGGAATGGCATGAGCCGTCGCGCGAAAAGCCCAACGGGCCTGCATTCGCAGCCGACGACGGCACTGTCTCGCCGTCATC
CGATCAGGCCGGACCGCGGCGGGAGCGCGAACCGTACTTCGGCGCCCCATCGGCCGAGCCCGACCTCGAACCGCGCTTCG
GCGCCGGAGCAGGCGCCGGCGCACGCGGCCAATACGGGGAGCCCTACGACGGCCCGTTCGCGTCGTCGCCCGGCGGCGCC
GACGATGCGTTCGCCGTCACGCGCGAGCCGCGCGAGCCGGAAGCGAAGCGTCTAATGTGGCAGGTCGCGGGCGGCGTCGC
GGCCGGCCTGCTCGGCTGTTTGCTGCTGATGCAGCTTGCCTGGTGGCAACGTGAAACGGTGATGGTCGCGTGGCCCGACT
CGCAGTCGCTGTTCGTGAAGGCCTGCGCGAATCTGGGCTGCAAGATCGAGCCGCCGCGCGATATCGACGGGTTGCTGGTC
GAGCCGTCGGATCTCCGACAAGTGGACGGTCCACACAAGCTCGAGTTAAAGATGCCGCTGCGCAACCGCTTCGATCTCGC
GCTCGCGTACCCTGCCGTCGAACTGACGTTGCTGGACGAGAACAACAACATCGCCGTGCGGCGCGTGCTGTGGCCGCAAG
ACTATGTGAAGCCCGGCACGCCGATCGCAGCGGGCCTACCCGCACGCACGACGCAGACGATGATCGTGCGGCTCGACACG
GGCAACACGGTCGCCTCGAACTTCCGCGTGCAGATCTTCTATCCGTAA

Upstream 100 bases:

>100_bases
CCTTGCAGGTACGCGTCGCGAAAGCAATTAGAATAAGGCATATTTGCTTGCTTCCGGCCCCATTCGGCACCCTGGCCGCC
AACCGGTCTTTCGGCTCGAT

Downstream 100 bases:

>100_bases
CCCGTCGATCTGCAGCGCGTGCAGCTTGTCCGCGCGTCCGGCACGAACCGGTCGCGCATCCCGTCAATCCCTGACGAATC
TTCGGAGCACAACATGAGTC

Product: Zinc finger-domain-containing protein

Products: NA

Alternate protein names: Zinc Finger/Thioredoxin Domain Protein; FHA Domain-Containing Protein; Zinc Finger/Thioredoxin

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MLLATRCPFCETVFRLQREQLTLRRGLVRCGHCKQVFDASSSLFDVSDGVSIDKAKPVTIDDVTAHTLETLANGAQTPAP
GAQPAPGERVAAEPRVEHETTRAEEAPAIHHVAAEVAEPRIEVGAPHPAAAVETPSPDIAEPSVQSGQAASPDAGTEDAP
SVDAPDFRAEAWNPWAPAPDASIDGRLRHTASTIPINPVTIPRSAQPPITLELTESEPMNLEKAIARKPGEPHIEAGAEQ
RAGSAVDTLAEPGIAEPAGTPAASKSEPAFEATPARDLARDLHELPTHGWRAAEPLRESVETHPEQAEPGREAPLRPAFD
KEWHEPSREKPNGPAFAADDGTVSPSSDQAGPRREREPYFGAPSAEPDLEPRFGAGAGAGARGQYGEPYDGPFASSPGGA
DDAFAVTREPREPEAKRLMWQVAGGVAAGLLGCLLLMQLAWWQRETVMVAWPDSQSLFVKACANLGCKIEPPRDIDGLLV
EPSDLRQVDGPHKLELKMPLRNRFDLALAYPAVELTLLDENNNIAVRRVLWPQDYVKPGTPIAAGLPARTTQTMIVRLDT
GNTVASNFRVQIFYP

Sequences:

>Translated_575_residues
MLLATRCPFCETVFRLQREQLTLRRGLVRCGHCKQVFDASSSLFDVSDGVSIDKAKPVTIDDVTAHTLETLANGAQTPAP
GAQPAPGERVAAEPRVEHETTRAEEAPAIHHVAAEVAEPRIEVGAPHPAAAVETPSPDIAEPSVQSGQAASPDAGTEDAP
SVDAPDFRAEAWNPWAPAPDASIDGRLRHTASTIPINPVTIPRSAQPPITLELTESEPMNLEKAIARKPGEPHIEAGAEQ
RAGSAVDTLAEPGIAEPAGTPAASKSEPAFEATPARDLARDLHELPTHGWRAAEPLRESVETHPEQAEPGREAPLRPAFD
KEWHEPSREKPNGPAFAADDGTVSPSSDQAGPRREREPYFGAPSAEPDLEPRFGAGAGAGARGQYGEPYDGPFASSPGGA
DDAFAVTREPREPEAKRLMWQVAGGVAAGLLGCLLLMQLAWWQRETVMVAWPDSQSLFVKACANLGCKIEPPRDIDGLLV
EPSDLRQVDGPHKLELKMPLRNRFDLALAYPAVELTLLDENNNIAVRRVLWPQDYVKPGTPIAAGLPARTTQTMIVRLDT
GNTVASNFRVQIFYP
>Mature_575_residues
MLLATRCPFCETVFRLQREQLTLRRGLVRCGHCKQVFDASSSLFDVSDGVSIDKAKPVTIDDVTAHTLETLANGAQTPAP
GAQPAPGERVAAEPRVEHETTRAEEAPAIHHVAAEVAEPRIEVGAPHPAAAVETPSPDIAEPSVQSGQAASPDAGTEDAP
SVDAPDFRAEAWNPWAPAPDASIDGRLRHTASTIPINPVTIPRSAQPPITLELTESEPMNLEKAIARKPGEPHIEAGAEQ
RAGSAVDTLAEPGIAEPAGTPAASKSEPAFEATPARDLARDLHELPTHGWRAAEPLRESVETHPEQAEPGREAPLRPAFD
KEWHEPSREKPNGPAFAADDGTVSPSSDQAGPRREREPYFGAPSAEPDLEPRFGAGAGAGARGQYGEPYDGPFASSPGGA
DDAFAVTREPREPEAKRLMWQVAGGVAAGLLGCLLLMQLAWWQRETVMVAWPDSQSLFVKACANLGCKIEPPRDIDGLLV
EPSDLRQVDGPHKLELKMPLRNRFDLALAYPAVELTLLDENNNIAVRRVLWPQDYVKPGTPIAAGLPARTTQTMIVRLDT
GNTVASNFRVQIFYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61676; Mature: 61676

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLATRCPFCETVFRLQREQLTLRRGLVRCGHCKQVFDASSSLFDVSDGVSIDKAKPVTI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCCCCCCCEE
DDVTAHTLETLANGAQTPAPGAQPAPGERVAAEPRVEHETTRAEEAPAIHHVAAEVAEPR
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCC
IEVGAPHPAAAVETPSPDIAEPSVQSGQAASPDAGTEDAPSVDAPDFRAEAWNPWAPAPD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASIDGRLRHTASTIPINPVTIPRSAQPPITLELTESEPMNLEKAIARKPGEPHIEAGAEQ
CCCCCCCHHCCCCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHCCHHH
RAGSAVDTLAEPGIAEPAGTPAASKSEPAFEATPARDLARDLHELPTHGWRAAEPLRESV
HCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
ETHPEQAEPGREAPLRPAFDKEWHEPSREKPNGPAFAADDGTVSPSSDQAGPRREREPYF
HCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
GAPSAEPDLEPRFGAGAGAGARGQYGEPYDGPFASSPGGADDAFAVTREPREPEAKRLMW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
QVAGGVAAGLLGCLLLMQLAWWQRETVMVAWPDSQSLFVKACANLGCKIEPPRDIDGLLV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEE
EPSDLRQVDGPHKLELKMPLRNRFDLALAYPAVELTLLDENNNIAVRRVLWPQDYVKPGT
CCHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEEECCCCEEEEEEECCHHHCCCCC
PIAAGLPARTTQTMIVRLDTGNTVASNFRVQIFYP
CCCCCCCCCCCEEEEEEECCCCEEECCEEEEEECC
>Mature Secondary Structure
MLLATRCPFCETVFRLQREQLTLRRGLVRCGHCKQVFDASSSLFDVSDGVSIDKAKPVTI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCCCCCCCCCEE
DDVTAHTLETLANGAQTPAPGAQPAPGERVAAEPRVEHETTRAEEAPAIHHVAAEVAEPR
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCC
IEVGAPHPAAAVETPSPDIAEPSVQSGQAASPDAGTEDAPSVDAPDFRAEAWNPWAPAPD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASIDGRLRHTASTIPINPVTIPRSAQPPITLELTESEPMNLEKAIARKPGEPHIEAGAEQ
CCCCCCCHHCCCCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCHHCCHHH
RAGSAVDTLAEPGIAEPAGTPAASKSEPAFEATPARDLARDLHELPTHGWRAAEPLRESV
HCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
ETHPEQAEPGREAPLRPAFDKEWHEPSREKPNGPAFAADDGTVSPSSDQAGPRREREPYF
HCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
GAPSAEPDLEPRFGAGAGAGARGQYGEPYDGPFASSPGGADDAFAVTREPREPEAKRLMW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH
QVAGGVAAGLLGCLLLMQLAWWQRETVMVAWPDSQSLFVKACANLGCKIEPPRDIDGLLV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEE
EPSDLRQVDGPHKLELKMPLRNRFDLALAYPAVELTLLDENNNIAVRRVLWPQDYVKPGT
CCHHHHHCCCCCEEEEECCCCCCCCEEEECCEEEEEEEECCCCEEEEEEECCHHHCCCCC
PIAAGLPARTTQTMIVRLDTGNTVASNFRVQIFYP
CCCCCCCCCCCEEEEEEECCCCEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA