| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477374
Identifier: 186477374
GI number: 186477374
Start: 2966029
End: 2966682
Strand: Direct
Name: 186477374
Synonym: Bphy_2626
Alternate gene names: NA
Gene position: 2966029-2966682 (Clockwise)
Preceding gene: 186477368
Following gene: 186477375
Centisome position: 85.25
GC content: 64.22
Gene sequence:
>654_bases ATGGTTCGCAAATCACACTTCGATCCGCAGCGCGTGCGCGAGGAAATCGCCATCGCGGCTGCACGGATGATTGCCGAGGA CGGTCTCGATTACTCGACGGCCAAGCGCAAGGCTGCGCGACAAGTCGTCGGGGAGACGCGCGTCGCGGGCGAATGGCTGC CGGATAACGACCAGATCGAGGAAGAAATCCGCGAGTACCAGTCGCTGTTCCAGGGCGACAGCCAGCCGGCCGTGCTGCGC CGGCTGCGCGAAATCGCGCTCGACTGGATGCAGCGGCTCGTGCCGTTCAACGCTTATCTGACGGGCGCCGTGCTCGGCGG GACGGCCGGCGAACATTCCGACATTCATCTGCAAGCGTTTTGCGACAACCCCAAGGAAGTCGCCATCTACCTGCTGAACG CCAATGTGCAATACGACGTTTCGGAAACTCGGCACTTTGCGGGTCGCGGCTACGTCGAAACATTGAGCTTTCTCTGGCGT CCGTCCAATGAAGGGCGGGACGCAGAACCGGTAGGCATCCACGTCGCGTTGTACGGCACCGACGATCTGCGCGGCGCGGT ACGTGCCGACGCACGCGGCCGACTGGCGCGCGCCGACGTCCGCGCCGTTCAGGCGCTGCTCGACGAAAGCGACGCCGCGC CTTCCACGAACTGA
Upstream 100 bases:
>100_bases TACGTGCTATTCCCAGGGGTCGCCGGTGCGCTGCTCAGGGCTCGCAGACGGCCGTGGCAGCGTCAAAAGGCCGCCAGGCT TTCTCTAGTATGATGACCGG
Downstream 100 bases:
>100_bases ACCTCTCGATCAGACACATTCACTATATGAAGCGAATCCTGGCAGTCGCGGCCGTCGCCGTCGTCGCGACCGTGGGCGGA GCGGTGGCGGGCCACTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MVRKSHFDPQRVREEIAIAAARMIAEDGLDYSTAKRKAARQVVGETRVAGEWLPDNDQIEEEIREYQSLFQGDSQPAVLR RLREIALDWMQRLVPFNAYLTGAVLGGTAGEHSDIHLQAFCDNPKEVAIYLLNANVQYDVSETRHFAGRGYVETLSFLWR PSNEGRDAEPVGIHVALYGTDDLRGAVRADARGRLARADVRAVQALLDESDAAPSTN
Sequences:
>Translated_217_residues MVRKSHFDPQRVREEIAIAAARMIAEDGLDYSTAKRKAARQVVGETRVAGEWLPDNDQIEEEIREYQSLFQGDSQPAVLR RLREIALDWMQRLVPFNAYLTGAVLGGTAGEHSDIHLQAFCDNPKEVAIYLLNANVQYDVSETRHFAGRGYVETLSFLWR PSNEGRDAEPVGIHVALYGTDDLRGAVRADARGRLARADVRAVQALLDESDAAPSTN >Mature_217_residues MVRKSHFDPQRVREEIAIAAARMIAEDGLDYSTAKRKAARQVVGETRVAGEWLPDNDQIEEEIREYQSLFQGDSQPAVLR RLREIALDWMQRLVPFNAYLTGAVLGGTAGEHSDIHLQAFCDNPKEVAIYLLNANVQYDVSETRHFAGRGYVETLSFLWR PSNEGRDAEPVGIHVALYGTDDLRGAVRADARGRLARADVRAVQALLDESDAAPSTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24192; Mature: 24192
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRKSHFDPQRVREEIAIAAARMIAEDGLDYSTAKRKAARQVVGETRVAGEWLPDNDQIE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH EEIREYQSLFQGDSQPAVLRRLREIALDWMQRLVPFNAYLTGAVLGGTAGEHSDIHLQAF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEE CDNPKEVAIYLLNANVQYDVSETRHFAGRGYVETLSFLWRPSNEGRDAEPVGIHVALYGT CCCCCCEEEEEEECCEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECC DDLRGAVRADARGRLARADVRAVQALLDESDAAPSTN HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVRKSHFDPQRVREEIAIAAARMIAEDGLDYSTAKRKAARQVVGETRVAGEWLPDNDQIE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH EEIREYQSLFQGDSQPAVLRRLREIALDWMQRLVPFNAYLTGAVLGGTAGEHSDIHLQAF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEEE CDNPKEVAIYLLNANVQYDVSETRHFAGRGYVETLSFLWRPSNEGRDAEPVGIHVALYGT CCCCCCEEEEEEECCEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECC DDLRGAVRADARGRLARADVRAVQALLDESDAAPSTN HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA