Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yneN [H]

Identifier: 186477375

GI number: 186477375

Start: 2966709

End: 2967257

Strand: Direct

Name: yneN [H]

Synonym: Bphy_2627

Alternate gene names: 186477375

Gene position: 2966709-2967257 (Clockwise)

Preceding gene: 186477374

Following gene: 186477376

Centisome position: 85.27

GC content: 63.39

Gene sequence:

>549_bases
ATGAAGCGAATCCTGGCAGTCGCGGCCGTCGCCGTCGTCGCGACCGTGGGCGGAGCGGTGGCGGGCCACTGGCTGCTCGG
CAACAACGATATCGCGGGCGTCGCGAACGCCGCCCCCGCCGACAGCGCCGTCGCCGTCAATCAGCTGTGGGCCGCGAAGG
TGACCAACGCCGATGGCGCACCGCAATCGCTTGCCGGCTTCAAAGGGCATCCCGTCGTCGTCAACTTCTGGGCGTCGTGG
TGCGGACCGTGCGTCGAGGAAATGCCGTCGCTGTCTGCACTGCACAAGGAATATTCGAAGAAAGGCATCGAATTCGTCGG
CCTCGGCGTCGACTCCGACAAGAACATCAAGGCTTTCCTGCAGAAAGTGCCCGTCAGTTACCCGATTTACGTGGCGGGCT
TCGGCGGCGCTGACCTCGCACGCGCATTCGGCAACAATGCCGGCGGCTTGCCTTACACGGTCGTAATTGATGCCAAAGGC
GTCGTACGGTCGACAAAACTCGGCCAGATCAGGCCCGACGAGCTGAAACGCACGCTGGACGCCCTATAA

Upstream 100 bases:

>100_bases
GACTGGCGCGCGCCGACGTCCGCGCCGTTCAGGCGCTGCTCGACGAAAGCGACGCCGCGCCTTCCACGAACTGAACCTCT
CGATCAGACACATTCACTAT

Downstream 100 bases:

>100_bases
CGTCAGCATCTTTTTGACATTTAGTTGAGATCGTTTGCACTCAGATTGGACGATATTCGCAACGAAATGTCAGAAGTTCC
GCCAGTTGCTGCTATCCTGG

Product: redoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKRILAVAAVAVVATVGGAVAGHWLLGNNDIAGVANAAPADSAVAVNQLWAAKVTNADGAPQSLAGFKGHPVVVNFWASW
CGPCVEEMPSLSALHKEYSKKGIEFVGLGVDSDKNIKAFLQKVPVSYPIYVAGFGGADLARAFGNNAGGLPYTVVIDAKG
VVRSTKLGQIRPDELKRTLDAL

Sequences:

>Translated_182_residues
MKRILAVAAVAVVATVGGAVAGHWLLGNNDIAGVANAAPADSAVAVNQLWAAKVTNADGAPQSLAGFKGHPVVVNFWASW
CGPCVEEMPSLSALHKEYSKKGIEFVGLGVDSDKNIKAFLQKVPVSYPIYVAGFGGADLARAFGNNAGGLPYTVVIDAKG
VVRSTKLGQIRPDELKRTLDAL
>Mature_182_residues
MKRILAVAAVAVVATVGGAVAGHWLLGNNDIAGVANAAPADSAVAVNQLWAAKVTNADGAPQSLAGFKGHPVVVNFWASW
CGPCVEEMPSLSALHKEYSKKGIEFVGLGVDSDKNIKAFLQKVPVSYPIYVAGFGGADLARAFGNNAGGLPYTVVIDAKG
VVRSTKLGQIRPDELKRTLDAL

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 18854; Mature: 18854

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILAVAAVAVVATVGGAVAGHWLLGNNDIAGVANAAPADSAVAVNQLWAAKVTNADGA
CHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PQSLAGFKGHPVVVNFWASWCGPCVEEMPSLSALHKEYSKKGIEFVGLGVDSDKNIKAFL
CHHHCCCCCCCEEEEEHHHHCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
QKVPVSYPIYVAGFGGADLARAFGNNAGGLPYTVVIDAKGVVRSTKLGQIRPDELKRTLD
HHCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHH
AL
CC
>Mature Secondary Structure
MKRILAVAAVAVVATVGGAVAGHWLLGNNDIAGVANAAPADSAVAVNQLWAAKVTNADGA
CHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PQSLAGFKGHPVVVNFWASWCGPCVEEMPSLSALHKEYSKKGIEFVGLGVDSDKNIKAFL
CHHHCCCCCCCEEEEEHHHHCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
QKVPVSYPIYVAGFGGADLARAFGNNAGGLPYTVVIDAKGVVRSTKLGQIRPDELKRTLD
HHCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCHHHHHHHHH
AL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]