| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477356
Identifier: 186477356
GI number: 186477356
Start: 2946871
End: 2947383
Strand: Direct
Name: 186477356
Synonym: Bphy_2608
Alternate gene names: NA
Gene position: 2946871-2947383 (Clockwise)
Preceding gene: 186477355
Following gene: 186477368
Centisome position: 84.7
GC content: 63.16
Gene sequence:
>513_bases ATGTCTCGACATATCGACCGCGATGAACTGATCCGCCGCTTCGACCTTCAGCCGCATCCCGAAGGCGGCTTTTTCCGCGA AACGTATCGCTCCGCCCATCCTGTTCACCGCGCTCGCTCAGCAGATAAACGCTCGGCGTCGACGGCGATCTACTACCTGC TCTGCGACGGCGCACACTCCGCGTGGCATCGCATCCAATCCGACGAAGTCTGGCATTTCTACGCCGGCGATCCGCTCAAC GTCTACGTACTCGAAGACGGCGGCGCGCTCACCGTGCACCGTCTCGGCAACTCGCTCGAACAGGCCGACTGCGTGTTTCA GGCCGTCGTATCGTCCGGCCGCTGGTTCGCCGCGCAATGCGACGACGCCGCGAGCGTGGCGCTCGTCGGCTGCACGGTCG CGCCAGGATTCGAGTTCAGCGAGTTTGAAATGGCGAATGTAGATGCGCTGCTGCGCGACTATCCGCAACAGCGGGAACTG ATAATCAGCCTCGGGCCGGCCGTCACGCGCTAG
Upstream 100 bases:
>100_bases CACATGCATTGCGCGGGCTGCTGACCCTGCTCGACGAACGCGAGCGCTGACTTCTTCCGCCGTGGACGGCGGCAGCCGTT CTCGATGACAGCAGGAAATC
Downstream 100 bases:
>100_bases ACGGGACCGGCTCGTGACGCAACGAGCCGCGTTTCAGAGAAACGCGTTGATGCGCTCGCGCGTATCTTTCGCGGCCTGCG CTGCGGCTTCGACCCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSRHIDRDELIRRFDLQPHPEGGFFRETYRSAHPVHRARSADKRSASTAIYYLLCDGAHSAWHRIQSDEVWHFYAGDPLN VYVLEDGGALTVHRLGNSLEQADCVFQAVVSSGRWFAAQCDDAASVALVGCTVAPGFEFSEFEMANVDALLRDYPQQREL IISLGPAVTR
Sequences:
>Translated_170_residues MSRHIDRDELIRRFDLQPHPEGGFFRETYRSAHPVHRARSADKRSASTAIYYLLCDGAHSAWHRIQSDEVWHFYAGDPLN VYVLEDGGALTVHRLGNSLEQADCVFQAVVSSGRWFAAQCDDAASVALVGCTVAPGFEFSEFEMANVDALLRDYPQQREL IISLGPAVTR >Mature_169_residues SRHIDRDELIRRFDLQPHPEGGFFRETYRSAHPVHRARSADKRSASTAIYYLLCDGAHSAWHRIQSDEVWHFYAGDPLNV YVLEDGGALTVHRLGNSLEQADCVFQAVVSSGRWFAAQCDDAASVALVGCTVAPGFEFSEFEMANVDALLRDYPQQRELI ISLGPAVTR
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19068; Mature: 18937
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHIDRDELIRRFDLQPHPEGGFFRETYRSAHPVHRARSADKRSASTAIYYLLCDGAHS CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEECCCHH AWHRIQSDEVWHFYAGDPLNVYVLEDGGALTVHRLGNSLEQADCVFQAVVSSGRWFAAQC HHHHCCCCCEEEEECCCCEEEEEECCCCEEEHHHHCCCHHHHHHHHHHHHHCCCEEEECC DDAASVALVGCTVAPGFEFSEFEMANVDALLRDYPQQRELIISLGPAVTR CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCC >Mature Secondary Structure SRHIDRDELIRRFDLQPHPEGGFFRETYRSAHPVHRARSADKRSASTAIYYLLCDGAHS CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEEECCCHH AWHRIQSDEVWHFYAGDPLNVYVLEDGGALTVHRLGNSLEQADCVFQAVVSSGRWFAAQC HHHHCCCCCEEEEECCCCEEEEEECCCCEEEHHHHCCCHHHHHHHHHHHHHCCCEEEECC DDAASVALVGCTVAPGFEFSEFEMANVDALLRDYPQQRELIISLGPAVTR CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA