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The map label for this gene is rnaSA [H]

Identifier: 186477351

GI number: 186477351

Start: 2941326

End: 2941727

Strand: Reverse

Name: rnaSA [H]

Synonym: Bphy_2603

Alternate gene names: 186477351

Gene position: 2941727-2941326 (Counterclockwise)

Preceding gene: 186477352

Following gene: 186477350

Centisome position: 84.55

GC content: 62.69

Gene sequence:

>402_bases
ATGGCACGCAAGTGGCTCCGCGACGGCGTGCTGATCGCCGCCTTGACGGTCGGCGGTCTTGTCGGCGGTTTTTCGTCAGG
CGCCTGGGCTCGGGAAGCGCAAGAGGGACAGGGCGGAGGCACCATCGCGGCGGCGCAATTGCCGCCCGAAGCCGTCAGTA
CATTGAACTTGATTGCAGCCGGCGGGCCTTACCCGTATGAGAAGGACGGCGTCGTATTCGGCAATCGTGAACGGTTGCTG
CCGTCGCACCGGCGCGGCTATTACCACGAATACACCGTTCCCACGCCAGGCGCCCGCGATCGCGGCGCACGCCGCATAGT
CTGTGGAGGGCCGCTGAGGCGGACCAGCAATTGTTATTACTCAGACGACCACTACGCCAGTTTTAATCGCATCATTGAAT
GA

Upstream 100 bases:

>100_bases
TTTGTCCGACTAATGAACATTGATTCCAAAGGACATTAGCGATACGCTTACGACTTTCATGGTCGTCAAACTCGTTAGTC
AACAGCGGGAATCCTGATTC

Downstream 100 bases:

>100_bases
CATCGGGATAATCGGCATGAGCGACAACGTCTACGCGCACGACTCGAAAGTCGCGACGGATTTTTTCGCGGCCGGCGACG
GCAATATGTTTCAGCGCGTC

Product: guanine-specific ribonuclease N1 and T1

Products: NA

Alternate protein names: RNase Sa [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MARKWLRDGVLIAALTVGGLVGGFSSGAWAREAQEGQGGGTIAAAQLPPEAVSTLNLIAAGGPYPYEKDGVVFGNRERLL
PSHRRGYYHEYTVPTPGARDRGARRIVCGGPLRRTSNCYYSDDHYASFNRIIE

Sequences:

>Translated_133_residues
MARKWLRDGVLIAALTVGGLVGGFSSGAWAREAQEGQGGGTIAAAQLPPEAVSTLNLIAAGGPYPYEKDGVVFGNRERLL
PSHRRGYYHEYTVPTPGARDRGARRIVCGGPLRRTSNCYYSDDHYASFNRIIE
>Mature_132_residues
ARKWLRDGVLIAALTVGGLVGGFSSGAWAREAQEGQGGGTIAAAQLPPEAVSTLNLIAAGGPYPYEKDGVVFGNRERLLP
SHRRGYYHEYTVPTPGARDRGARRIVCGGPLRRTSNCYYSDDHYASFNRIIE

Specific function: Unknown

COG id: COG4290

COG function: function code F; Guanyl-specific ribonuclease Sa

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonuclease N1/T1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000026
- InterPro:   IPR016191 [H]

Pfam domain/function: PF00545 Ribonuclease [H]

EC number: =3.1.27.3 [H]

Molecular weight: Translated: 14396; Mature: 14265

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKWLRDGVLIAALTVGGLVGGFSSGAWAREAQEGQGGGTIAAAQLPPEAVSTLNLIAA
CCCCHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEEEC
GGPYPYEKDGVVFGNRERLLPSHRRGYYHEYTVPTPGARDRGARRIVCGGPLRRTSNCYY
CCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEE
SDDHYASFNRIIE
CCCCCHHHHHHCC
>Mature Secondary Structure 
ARKWLRDGVLIAALTVGGLVGGFSSGAWAREAQEGQGGGTIAAAQLPPEAVSTLNLIAA
CCCHHHCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHEEEC
GGPYPYEKDGVVFGNRERLLPSHRRGYYHEYTVPTPGARDRGARRIVCGGPLRRTSNCYY
CCCCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCEE
SDDHYASFNRIIE
CCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098582; 3118883; 1654932; 8396032; 9757110; 9819211; 11455593 [H]