| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is maeB [H]
Identifier: 186477352
GI number: 186477352
Start: 2942108
End: 2944402
Strand: Reverse
Name: maeB [H]
Synonym: Bphy_2604
Alternate gene names: 186477352
Gene position: 2944402-2942108 (Counterclockwise)
Preceding gene: 186477357
Following gene: 186477351
Centisome position: 84.63
GC content: 63.75
Gene sequence:
>2295_bases ATGTCGACGCCCGTCAATACCAAACTCCGTGAAGCCGCTCTCGATTACCACGAATTCCCGACCCCCGGGAAGATCGCGAT CGCCCCGACGAAGCAGATGATCAACCAGCGCGACCTCGCACTGGCGTACTCGCCGGGCGTTGCGTTCGCGTGCGAGGCGA TCGTCGAGAATCCGCTGAATGCCGCGCGCTTCACCGCGCGCAGCAACCTGGTCGGCGTCGTGTCGAACGGCACGGCAGTG CTCGGTCTCGGCAACATCGGGCCGCTCGCGTCGAAGCCGGTCATGGAAGGCAAGGCCGTGCTGTTCAAGAAGTTCGCCGG CATCGACGTGTTCGACATCGAGTTGAACGAATCGGACCCGCACAAGCTGGTCGAGGTGATCGCCGCGCTGGAGCCGACGT TCGGCGGCATCAACCTGGAAGATATCAAGGCGCCGGACTGCTTTATCGTCGAGCGCGAGTGCCGCAAGCGCATGAAGATC CCCGTCTTCCACGACGACCAGCACGGCACGGCAATCGTCGTCGCGGCGGCGATCTCGAACGGCCTGAAGGTGGTCGGCAA GAGCATCAAGGAAGTGAAGCTGGTGGCGTCGGGCGCGGGCGCGGCGTCGCTCGCGTGTCTGAACCTGCTGGTCGACCTCG GCATGCCGCTCGAAAACATCTACGTGACGGACCTGGCCGGCGTGGTCTACAAGGGCCGCACGGAACTGATGGATCCGGAC AAGGAGCGTTTTGCGCGTGAGACGGACGCCCGCACGCTGGCGGAAGTGATGGACGGCGCGGACGTGTTCCTCGGCCTCTC GGCAGGCGGCGTGCTCAAGCAGGACATGGTCAAGCAGATGGCCGGGAAGCCGCTGATCCTGGCGCTTGCCAATCCGACGC CGGAAATCCTGCCGGAACTGGCGCTCGAAGTGCGTCCGGATGCCGTGCTGGCAACGGGTCGCACCGACTACCCGAATCAG GTCAACAACGTCCTGTGCTTCCCGTTCATCTTCCGTGGCGCGCTGGATGTCGGCGCAACCGTCATTACGAAGGAAATGGA AATCGCCGCGGTCAACGCGATCGCGGAACTGGCGCGTCAGGAGCAGTCGGACATCGTCGCGACGGCGTACGGCATTCAGG ATCTGTCGTTCGGACCGGAATACCTGATTCCGAAGCCCTTCGATCCGCGCCTGATCGTGCAGATCGCGCCCGCCGTTGCG CAGGCGGCGATGGATTCGGGCGTCGCGACGCGTCCGATCGAGGACATGGAGGCGTACAAGCAGCATTTGCAGCAGTTCGT GTACCACAGCGGCACGACGATGAAGCCGATCTTCCAGCTGGCGCGCGGCGTCGAGCCGGAGAAGAAGCGCATCGTGTTTG CGGAAGGCGAGGAAGAGCGCGTGCTGCGCGCGGTGCAGATCGTGGTCGACGAAAAGCTCGCGAAGCCGATCCTGATCGGC CGTCCGGCCGTGATCGAGCAGCGCATCGCGAAGTTCGGGCTGCGTCTGGTGAACGGCCAGGACTACACGATCGTCAACAC GGACCACGACGAGCGTTATCGTGACTTCTGGCAGACGTACCACAAGATGATGTGTCGCAAGGGCTTCACCGAGCAGATGG CGAAGCTGGAAATGCGCCGCCGTACGACGCTGATCGGCTCGATGCTGGTCACGAAGGGGCACGCCGACGGCATGATCTGC GGCACGGTCAGCACGACCCATCGCCACTTGCACTTCATCGACCAGGTGATCGGCAAGAAGGACGGCGCCAAGGTCTACGC GGCGATGAATGCGCTCGTGCTGCCGAATCGCCAGATTTTTCTCGTCGATACCCACGTGAACGTCGATCCGACGGCCGAAG AACTCGCGGAAATCACGATCATGGCGGCGGAGGAAGTGCGCCGTTTCGGCATCGAGCCGAAGATCGCGCTGCTGTCGCAT TCGAACTTTGGCACGAGCAATGCGCCGTCCGCGCAGAAGATGCGCGACGTGCTGGCGCTGCTGCAGGAGCGCGCGCCGCA TCTGCAGGTGGACGGCGAAATGCACGGCGACCTCGCGCTCGACGCGAACCTGCGCAAGGAAATTCTGGCCGAGTCGACGC TGGAAGGCGACGCGAACCTGCTGGTGCTGCCCAATATCGACGCCGCGAACATCTCGTACAACCTGCTGAAGACGGCGGCG GGCAACAACATCGCTATCGGGCCGATCCTGCTCGGCGCGGCCAAGCCCGTGCACGTGCTGACCCCGTCGGCAACGGTTCG CCGGATCGTCAACATGACGGCGCTGCTGGTGGCAGACGTCAACGCGTCGCGTTAA
Upstream 100 bases:
>100_bases CGGTCGCGGGACCTGCACCCGGATTGCAGGCTTCGACTTTTGGGATTGGCGCTACAATGCCGTCGAACATCTATTCTAAT CCGCACTTCCAAGTCCGCTT
Downstream 100 bases:
>100_bases GCTGTCCCTTTCTCTGCGCGAGTCGGTGAATTCCAGTTCGCGCGGGCAAAAAAAAGGCGTGCCCGCAATGGGCACGCCTT CGAGCAATGGCTGGGGATTA
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MSTPVNTKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEAIVENPLNAARFTARSNLVGVVSNGTAV LGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKI PVFHDDQHGTAIVVAAAISNGLKVVGKSIKEVKLVASGAGAASLACLNLLVDLGMPLENIYVTDLAGVVYKGRTELMDPD KERFARETDARTLAEVMDGADVFLGLSAGGVLKQDMVKQMAGKPLILALANPTPEILPELALEVRPDAVLATGRTDYPNQ VNNVLCFPFIFRGALDVGATVITKEMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVQIAPAVA QAAMDSGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQLARGVEPEKKRIVFAEGEEERVLRAVQIVVDEKLAKPILIG RPAVIEQRIAKFGLRLVNGQDYTIVNTDHDERYRDFWQTYHKMMCRKGFTEQMAKLEMRRRTTLIGSMLVTKGHADGMIC GTVSTTHRHLHFIDQVIGKKDGAKVYAAMNALVLPNRQIFLVDTHVNVDPTAEELAEITIMAAEEVRRFGIEPKIALLSH SNFGTSNAPSAQKMRDVLALLQERAPHLQVDGEMHGDLALDANLRKEILAESTLEGDANLLVLPNIDAANISYNLLKTAA GNNIAIGPILLGAAKPVHVLTPSATVRRIVNMTALLVADVNASR
Sequences:
>Translated_764_residues MSTPVNTKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEAIVENPLNAARFTARSNLVGVVSNGTAV LGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKI PVFHDDQHGTAIVVAAAISNGLKVVGKSIKEVKLVASGAGAASLACLNLLVDLGMPLENIYVTDLAGVVYKGRTELMDPD KERFARETDARTLAEVMDGADVFLGLSAGGVLKQDMVKQMAGKPLILALANPTPEILPELALEVRPDAVLATGRTDYPNQ VNNVLCFPFIFRGALDVGATVITKEMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVQIAPAVA QAAMDSGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQLARGVEPEKKRIVFAEGEEERVLRAVQIVVDEKLAKPILIG RPAVIEQRIAKFGLRLVNGQDYTIVNTDHDERYRDFWQTYHKMMCRKGFTEQMAKLEMRRRTTLIGSMLVTKGHADGMIC GTVSTTHRHLHFIDQVIGKKDGAKVYAAMNALVLPNRQIFLVDTHVNVDPTAEELAEITIMAAEEVRRFGIEPKIALLSH SNFGTSNAPSAQKMRDVLALLQERAPHLQVDGEMHGDLALDANLRKEILAESTLEGDANLLVLPNIDAANISYNLLKTAA GNNIAIGPILLGAAKPVHVLTPSATVRRIVNMTALLVADVNASR >Mature_763_residues STPVNTKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEAIVENPLNAARFTARSNLVGVVSNGTAVL GLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIP VFHDDQHGTAIVVAAAISNGLKVVGKSIKEVKLVASGAGAASLACLNLLVDLGMPLENIYVTDLAGVVYKGRTELMDPDK ERFARETDARTLAEVMDGADVFLGLSAGGVLKQDMVKQMAGKPLILALANPTPEILPELALEVRPDAVLATGRTDYPNQV NNVLCFPFIFRGALDVGATVITKEMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVQIAPAVAQ AAMDSGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQLARGVEPEKKRIVFAEGEEERVLRAVQIVVDEKLAKPILIGR PAVIEQRIAKFGLRLVNGQDYTIVNTDHDERYRDFWQTYHKMMCRKGFTEQMAKLEMRRRTTLIGSMLVTKGHADGMICG TVSTTHRHLHFIDQVIGKKDGAKVYAAMNALVLPNRQIFLVDTHVNVDPTAEELAEITIMAAEEVRRFGIEPKIALLSHS NFGTSNAPSAQKMRDVLALLQERAPHLQVDGEMHGDLALDANLRKEILAESTLEGDANLLVLPNIDAANISYNLLKTAAG NNIAIGPILLGAAKPVHVLTPSATVRRIVNMTALLVADVNASR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=343, Percent_Identity=25.6559766763848, Blast_Score=81, Evalue=4e-15, Organism=Homo sapiens, GI62420882, Length=352, Percent_Identity=27.5568181818182, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI62420880, Length=352, Percent_Identity=27.5568181818182, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI239049447, Length=352, Percent_Identity=27.5568181818182, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI4505145, Length=370, Percent_Identity=26.2162162162162, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI270265879, Length=319, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1788806, Length=756, Percent_Identity=61.7724867724868, Blast_Score=962, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=319, Percent_Identity=33.2288401253918, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=30.4761904761905, Blast_Score=137, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17537199, Length=474, Percent_Identity=24.4725738396624, Blast_Score=73, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=29.2887029288703, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362672, Length=474, Percent_Identity=26.3713080168776, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI281362674, Length=474, Percent_Identity=26.3713080168776, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI21356279, Length=474, Percent_Identity=26.3713080168776, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI78707242, Length=408, Percent_Identity=24.5098039215686, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI78707238, Length=408, Percent_Identity=24.5098039215686, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646388, Length=350, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24646386, Length=350, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI78707240, Length=349, Percent_Identity=24.9283667621776, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83073; Mature: 82942
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVNTKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEAIVENPLN CCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHCCCH AARFTARSNLVGVVSNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDP HHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCH HKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVAAAISN HHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEEEHHHC GLKVVGKSIKEVKLVASGAGAASLACLNLLVDLGMPLENIYVTDLAGVVYKGRTELMDPD CHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCHHCCCCC KERFARETDARTLAEVMDGADVFLGLSAGGVLKQDMVKQMAGKPLILALANPTPEILPEL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ALEVRPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATVITKEMEIAAVNAIAELARQ HHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHH EQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVQIAPAVAQAAMDSGVATRPIEDMEAYK HHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHHHH QHLQQFVYHSGTTMKPIFQLARGVEPEKKRIVFAEGEEERVLRAVQIVVDEKLAKPILIG HHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEC RPAVIEQRIAKFGLRLVNGQDYTIVNTDHDERYRDFWQTYHKMMCRKGFTEQMAKLEMRR CHHHHHHHHHHHCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RTTLIGSMLVTKGHADGMICGTVSTTHRHLHFIDQVIGKKDGAKVYAAMNALVLPNRQIF HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEHHEEEECCCEEE LVDTHVNVDPTAEELAEITIMAAEEVRRFGIEPKIALLSHSNFGTSNAPSAQKMRDVLAL EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH LQERAPHLQVDGEMHGDLALDANLRKEILAESTLEGDANLLVLPNIDAANISYNLLKTAA HHHCCCCEEECCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCC GNNIAIGPILLGAAKPVHVLTPSATVRRIVNMTALLVADVNASR CCCEEECCEEECCCCCEEEECCCHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure STPVNTKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEAIVENPLN CCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHCCCH AARFTARSNLVGVVSNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDP HHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCH HKLVEVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVAAAISN HHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEEEHHHC GLKVVGKSIKEVKLVASGAGAASLACLNLLVDLGMPLENIYVTDLAGVVYKGRTELMDPD CHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCHHCCCCC KERFARETDARTLAEVMDGADVFLGLSAGGVLKQDMVKQMAGKPLILALANPTPEILPEL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ALEVRPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATVITKEMEIAAVNAIAELARQ HHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHH EQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVQIAPAVAQAAMDSGVATRPIEDMEAYK HHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCHHHHHHHH QHLQQFVYHSGTTMKPIFQLARGVEPEKKRIVFAEGEEERVLRAVQIVVDEKLAKPILIG HHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEEC RPAVIEQRIAKFGLRLVNGQDYTIVNTDHDERYRDFWQTYHKMMCRKGFTEQMAKLEMRR CHHHHHHHHHHHCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RTTLIGSMLVTKGHADGMICGTVSTTHRHLHFIDQVIGKKDGAKVYAAMNALVLPNRQIF HHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEHHEEEECCCEEE LVDTHVNVDPTAEELAEITIMAAEEVRRFGIEPKIALLSHSNFGTSNAPSAQKMRDVLAL EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH LQERAPHLQVDGEMHGDLALDANLRKEILAESTLEGDANLLVLPNIDAANISYNLLKTAA HHHCCCCEEECCCCCCCEEECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHCC GNNIAIGPILLGAAKPVHVLTPSATVRRIVNMTALLVADVNASR CCCEEECCEEECCCCCEEEECCCHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]