| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477350
Identifier: 186477350
GI number: 186477350
Start: 2940749
End: 2941309
Strand: Reverse
Name: 186477350
Synonym: Bphy_2602
Alternate gene names: NA
Gene position: 2941309-2940749 (Counterclockwise)
Preceding gene: 186477351
Following gene: 186477347
Centisome position: 84.54
GC content: 58.65
Gene sequence:
>561_bases ATGAGCGACAACGTCTACGCGCACGACTCGAAAGTCGCGACGGATTTTTTCGCGGCCGGCGACGGCAATATGTTTCAGCG CGTCATGCAGATGCGCGATGCCGGCCAGGCCCGTGACGTCCAGAACGAAGCCAGTACGGGCCTTTCATCGGAAGAGGAGC GCATGAGTCTTTTCCAGACCGTACGACCGAACATCGTGCAGTCGATCCGCGCATTCCGCGTGCAGGATCTCGCCGACGAA GCTAATCGGCTCGGTCAGCATTTTCTCTATGCGTTTGTCGGCAATGCCCAGTCCAAGCAGGAGGTCATGGAGACTATCGC GACGTCGTTCCTGTTTCCGAAGCATTTCGGCAAGAACTACGACGCGCTGTATGACTCACTGACCGACCTCGTACACAAGG CAGGGTCGCAGCCCGGTTTCGTCATCGTTCTCGAGGCGCTCCCCATCGCAATCAAGTTCGACAAGGAAGCGCGCGAGACG CTGCTCGACGTCTTCCGCGAAGCGGCGGAATTCTGGGCCGAACGCAAGGTGGCGTTCCGGGTGTTTTACTCGTTTGCCTG A
Upstream 100 bases:
>100_bases GTCTGTGGAGGGCCGCTGAGGCGGACCAGCAATTGTTATTACTCAGACGACCACTACGCCAGTTTTAATCGCATCATTGA ATGACATCGGGATAATCGGC
Downstream 100 bases:
>100_bases GTTGTTCGCGGTTCGACGGTTTTCGTCTGATCTGCAATAAAAAAGAAAGGCCCGCCGGAAACAGGCGGGCCTTTTGCATT TCAGTCGGGCTTCGTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Barstar Family Protein; Ribonuclease Inhibitor Barstar; Ribonuclease Inhibitor
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSDNVYAHDSKVATDFFAAGDGNMFQRVMQMRDAGQARDVQNEASTGLSSEEERMSLFQTVRPNIVQSIRAFRVQDLADE ANRLGQHFLYAFVGNAQSKQEVMETIATSFLFPKHFGKNYDALYDSLTDLVHKAGSQPGFVIVLEALPIAIKFDKEARET LLDVFREAAEFWAERKVAFRVFYSFA
Sequences:
>Translated_186_residues MSDNVYAHDSKVATDFFAAGDGNMFQRVMQMRDAGQARDVQNEASTGLSSEEERMSLFQTVRPNIVQSIRAFRVQDLADE ANRLGQHFLYAFVGNAQSKQEVMETIATSFLFPKHFGKNYDALYDSLTDLVHKAGSQPGFVIVLEALPIAIKFDKEARET LLDVFREAAEFWAERKVAFRVFYSFA >Mature_185_residues SDNVYAHDSKVATDFFAAGDGNMFQRVMQMRDAGQARDVQNEASTGLSSEEERMSLFQTVRPNIVQSIRAFRVQDLADEA NRLGQHFLYAFVGNAQSKQEVMETIATSFLFPKHFGKNYDALYDSLTDLVHKAGSQPGFVIVLEALPIAIKFDKEARETL LDVFREAAEFWAERKVAFRVFYSFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21067; Mature: 20936
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNVYAHDSKVATDFFAAGDGNMFQRVMQMRDAGQARDVQNEASTGLSSEEERMSLFQT CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH VRPNIVQSIRAFRVQDLADEANRLGQHFLYAFVGNAQSKQEVMETIATSFLFPKHFGKNY HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH DALYDSLTDLVHKAGSQPGFVIVLEALPIAIKFDKEARETLLDVFREAAEFWAERKVAFR HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH VFYSFA HHHHCC >Mature Secondary Structure SDNVYAHDSKVATDFFAAGDGNMFQRVMQMRDAGQARDVQNEASTGLSSEEERMSLFQT CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH VRPNIVQSIRAFRVQDLADEANRLGQHFLYAFVGNAQSKQEVMETIATSFLFPKHFGKNY HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH DALYDSLTDLVHKAGSQPGFVIVLEALPIAIKFDKEARETLLDVFREAAEFWAERKVAFR HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH VFYSFA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA