| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gltI [H]
Identifier: 186477321
GI number: 186477321
Start: 2892672
End: 2893565
Strand: Reverse
Name: gltI [H]
Synonym: Bphy_2573
Alternate gene names: 186477321
Gene position: 2893565-2892672 (Counterclockwise)
Preceding gene: 186477322
Following gene: 186477320
Centisome position: 83.17
GC content: 59.17
Gene sequence:
>894_bases ATGAAGGTTAAAAAAGCTGCGCTGCTTCTCGCGACTCTGGGTTTGTTCACCGTGGGCGCGCAAGCGCAGGACGCCGGCAC GCTCAAGAAGATCAAGGACACGGGTGTCATTTCGCTGGGCCACCGCGAATCGTCGATTCCGTTCTCGTACTACGATGACA AGCAGAACGTGATCGGCTACTCGCAGGAATTCGCGCTGAAGGTCGTGGATGCCGTCAAGCAGAAGCTGAACATGCCGAAC CTGAAGGTCAAGCTGACCCCGGTCACGTCGCAAAACCGCATTCCGCTGGTGCAGAACGGCACCGTCGACCTCGAATGCGG TTCGACCACCAACAACGCCGAGCGCCAGCAGCAAGTCTCGTTCTCGAACACGATCTTCGTCATCGGCACGCGCCTGATGA CGAAGAAGGATTCGGGCGTCAAGGACTGGGCCGACCTGAAGGGCAAGACCGTCGTGACGACGGCGGGCACCACGTCCGAG CGCCTGCTGCGCAAGATGAACCAGGACAAGAACATGGGCATGAACATCATCAGCGCGAAGGATCACGGCGAATCGTTCCT GACGCTGTCGACAGGTCGTGCCGCTGCGTTCATGATGGACGACGCACTGCTCGCAGGCGAGCGCGCGAAGTCGAACAATC CTGGCGATTTCGTGATCGTCGGCGCGCCGCAATCGCATGAAGCGTACGGCTGCATGCTGCGCAAGAACGATCCGGAGTTC AAGAAGGTCGTCGACGATGCGATCGCCAAGGTCGAAACGTCGGGCGAAGCGTCGCAGATCTACAAGAAGTGGTTCGAATC GCCGATTCCGCCGAAGGGCCTGAACCTGGCCTTCCCGGAAAGCGATGACATGAAGGCGCTGTACAAGGCACCGAACGACA AGGCAATCGACTAA
Upstream 100 bases:
>100_bases TGGCTTTACGCAACACTGCGTGCGGAACATGGTTAACAACCATACTTTCAGAATAATTACTGAGATACACTGGCGCCGGT TCTTGCCAAGGAGATCACAA
Downstream 100 bases:
>100_bases ATCTCGAGCAACCGTTACTCAGTCAACGTGTTGAACGGAACGGAAGGGGCAGGCGCTTCTTCCGTTTCTTTTTGTTGGAG TCTTCGTCATGTCATACCAC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID
Sequences:
>Translated_297_residues MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID >Mature_297_residues MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=66.4206642066421, Blast_Score=392, Evalue=1e-110, Organism=Escherichia coli, GI1788228, Length=248, Percent_Identity=27.0161290322581, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787031, Length=268, Percent_Identity=27.6119402985075, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1788649, Length=238, Percent_Identity=23.9495798319328, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32425; Mature: 32425
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCC SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVS CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH FSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAK HCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC DHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF CCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHH KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCC SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVS CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH FSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAK HCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC DHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF CCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHH KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]