Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is gltJ [H]

Identifier: 186477320

GI number: 186477320

Start: 2891843

End: 2892583

Strand: Reverse

Name: gltJ [H]

Synonym: Bphy_2572

Alternate gene names: 186477320

Gene position: 2892583-2891843 (Counterclockwise)

Preceding gene: 186477321

Following gene: 186477319

Centisome position: 83.14

GC content: 60.86

Gene sequence:

>741_bases
ATGTCATACCACTGGAACTGGGGCATTCTGCTGAGTCCGGTTTCCACCGGCGAACCGACCACCTATCTCGGCTGGCTGCT
GTCCGGCCTCTGGGTGACGGTCACGGTTTCGCTGTCCGCCTGGGTGATCGCGCTGATCGTAGGTTCGCTGTTCGGCGTGC
TGCGCACGGTGCCGAACAAAAAGCTCGCGGCCATTGGCACCGTCTACGTCGCCATCTTCCGTAACATTCCGCTGATCGTT
CAGTTCTTCATCTGGTATCTGGTGATACCGGAATTGCTGCCCGTTTCGATCGGTACATGGTTCAAGCAACTGCCGCCTGG
CGCGCAGTTCTTCTCGTCGTCAATCATCTGTCTCGGGCTCTTCACGGCTGCACGCGTGTGCGAGCAGGTGCGCTCGGGCA
TTAACGCGCTGCCGCGCGGCCAGCGTGGCGCGGGTCTCGCACTCGGCTTCACGCAATGGCAGACGTATCGCTACGTGCTG
CTGCCCGTCGCTTACCGGATCATCGTGCCGCCGCTCACGTCCGAGTTTCTGAACATCTTCAAGAACTCCGCCGTCGCATC
GACCATCGGTCTGCTCGATCTGTCCGCGCAGGCGCGCCAGCTCGTCGACTACACGGCGCAGACGTACGAGTCGTTCATCG
CCGTCACGGTTGCGTATCTGCTCATCAACCTGATCGTGATGACGCTGATGCGCATCGTCGAAGCCAAGAGCCGGCTGCCT
GGCTATATCGGAGGCAAGTGA

Upstream 100 bases:

>100_bases
GCAATCGACTAAATCTCGAGCAACCGTTACTCAGTCAACGTGTTGAACGGAACGGAAGGGGCAGGCGCTTCTTCCGTTTC
TTTTTGTTGGAGTCTTCGTC

Downstream 100 bases:

>100_bases
TGCATCATTTCGACTGGAGCGGTATTCCGGGCGCACTGCCGACGCTGTGGACGGGTGCCATCGTCACGCTCAAGATCACG
ATTCTCGCGATTGTGATCGG

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIV
QFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVL
LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP
GYIGGK

Sequences:

>Translated_246_residues
MSYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIV
QFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVL
LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP
GYIGGK
>Mature_245_residues
SYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIVQ
FFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLL
PVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLPG
YIGGK

Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786874, Length=247, Percent_Identity=63.5627530364373, Blast_Score=325, Evalue=1e-90,
Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=29.4392523364486, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1786873, Length=202, Percent_Identity=29.7029702970297, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=27.1028037383178, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=39.344262295082, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=24.3362831858407, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082239, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788646, Length=217, Percent_Identity=27.1889400921659, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27149; Mature: 27017

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
SYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNK
CEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KLAAIGTVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
FTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIF
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GYIGGK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamate [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]