| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gltJ [H]
Identifier: 186477320
GI number: 186477320
Start: 2891843
End: 2892583
Strand: Reverse
Name: gltJ [H]
Synonym: Bphy_2572
Alternate gene names: 186477320
Gene position: 2892583-2891843 (Counterclockwise)
Preceding gene: 186477321
Following gene: 186477319
Centisome position: 83.14
GC content: 60.86
Gene sequence:
>741_bases ATGTCATACCACTGGAACTGGGGCATTCTGCTGAGTCCGGTTTCCACCGGCGAACCGACCACCTATCTCGGCTGGCTGCT GTCCGGCCTCTGGGTGACGGTCACGGTTTCGCTGTCCGCCTGGGTGATCGCGCTGATCGTAGGTTCGCTGTTCGGCGTGC TGCGCACGGTGCCGAACAAAAAGCTCGCGGCCATTGGCACCGTCTACGTCGCCATCTTCCGTAACATTCCGCTGATCGTT CAGTTCTTCATCTGGTATCTGGTGATACCGGAATTGCTGCCCGTTTCGATCGGTACATGGTTCAAGCAACTGCCGCCTGG CGCGCAGTTCTTCTCGTCGTCAATCATCTGTCTCGGGCTCTTCACGGCTGCACGCGTGTGCGAGCAGGTGCGCTCGGGCA TTAACGCGCTGCCGCGCGGCCAGCGTGGCGCGGGTCTCGCACTCGGCTTCACGCAATGGCAGACGTATCGCTACGTGCTG CTGCCCGTCGCTTACCGGATCATCGTGCCGCCGCTCACGTCCGAGTTTCTGAACATCTTCAAGAACTCCGCCGTCGCATC GACCATCGGTCTGCTCGATCTGTCCGCGCAGGCGCGCCAGCTCGTCGACTACACGGCGCAGACGTACGAGTCGTTCATCG CCGTCACGGTTGCGTATCTGCTCATCAACCTGATCGTGATGACGCTGATGCGCATCGTCGAAGCCAAGAGCCGGCTGCCT GGCTATATCGGAGGCAAGTGA
Upstream 100 bases:
>100_bases GCAATCGACTAAATCTCGAGCAACCGTTACTCAGTCAACGTGTTGAACGGAACGGAAGGGGCAGGCGCTTCTTCCGTTTC TTTTTGTTGGAGTCTTCGTC
Downstream 100 bases:
>100_bases TGCATCATTTCGACTGGAGCGGTATTCCGGGCGCACTGCCGACGCTGTGGACGGGTGCCATCGTCACGCTCAAGATCACG ATTCTCGCGATTGTGATCGG
Product: polar amino acid ABC transporter inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIV QFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP GYIGGK
Sequences:
>Translated_246_residues MSYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIV QFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVL LPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP GYIGGK >Mature_245_residues SYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIPLIVQ FFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLL PVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLPG YIGGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=247, Percent_Identity=63.5627530364373, Blast_Score=325, Evalue=1e-90, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=29.4392523364486, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI1786873, Length=202, Percent_Identity=29.7029702970297, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=27.1028037383178, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI48994930, Length=122, Percent_Identity=39.344262295082, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787086, Length=222, Percent_Identity=27.027027027027, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=24.3362831858407, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87082239, Length=136, Percent_Identity=30.1470588235294, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788646, Length=217, Percent_Identity=27.1889400921659, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27149; Mature: 27017
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNK CCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLAAIGTVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYIGGK CCCCCC >Mature Secondary Structure SYHWNWGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNK CEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KLAAIGTVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH FTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIF HHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH KNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAKSRLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYIGGK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]