Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is gltI [H]

Identifier: 186477321

GI number: 186477321

Start: 2892672

End: 2893565

Strand: Reverse

Name: gltI [H]

Synonym: Bphy_2573

Alternate gene names: 186477321

Gene position: 2893565-2892672 (Counterclockwise)

Preceding gene: 186477322

Following gene: 186477320

Centisome position: 83.17

GC content: 59.17

Gene sequence:

>894_bases
ATGAAGGTTAAAAAAGCTGCGCTGCTTCTCGCGACTCTGGGTTTGTTCACCGTGGGCGCGCAAGCGCAGGACGCCGGCAC
GCTCAAGAAGATCAAGGACACGGGTGTCATTTCGCTGGGCCACCGCGAATCGTCGATTCCGTTCTCGTACTACGATGACA
AGCAGAACGTGATCGGCTACTCGCAGGAATTCGCGCTGAAGGTCGTGGATGCCGTCAAGCAGAAGCTGAACATGCCGAAC
CTGAAGGTCAAGCTGACCCCGGTCACGTCGCAAAACCGCATTCCGCTGGTGCAGAACGGCACCGTCGACCTCGAATGCGG
TTCGACCACCAACAACGCCGAGCGCCAGCAGCAAGTCTCGTTCTCGAACACGATCTTCGTCATCGGCACGCGCCTGATGA
CGAAGAAGGATTCGGGCGTCAAGGACTGGGCCGACCTGAAGGGCAAGACCGTCGTGACGACGGCGGGCACCACGTCCGAG
CGCCTGCTGCGCAAGATGAACCAGGACAAGAACATGGGCATGAACATCATCAGCGCGAAGGATCACGGCGAATCGTTCCT
GACGCTGTCGACAGGTCGTGCCGCTGCGTTCATGATGGACGACGCACTGCTCGCAGGCGAGCGCGCGAAGTCGAACAATC
CTGGCGATTTCGTGATCGTCGGCGCGCCGCAATCGCATGAAGCGTACGGCTGCATGCTGCGCAAGAACGATCCGGAGTTC
AAGAAGGTCGTCGACGATGCGATCGCCAAGGTCGAAACGTCGGGCGAAGCGTCGCAGATCTACAAGAAGTGGTTCGAATC
GCCGATTCCGCCGAAGGGCCTGAACCTGGCCTTCCCGGAAAGCGATGACATGAAGGCGCTGTACAAGGCACCGAACGACA
AGGCAATCGACTAA

Upstream 100 bases:

>100_bases
TGGCTTTACGCAACACTGCGTGCGGAACATGGTTAACAACCATACTTTCAGAATAATTACTGAGATACACTGGCGCCGGT
TCTTGCCAAGGAGATCACAA

Downstream 100 bases:

>100_bases
ATCTCGAGCAACCGTTACTCAGTCAACGTGTTGAACGGAACGGAAGGGGCAGGCGCTTCTTCCGTTTCTTTTTGTTGGAG
TCTTCGTCATGTCATACCAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN
LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE
RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF
KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID

Sequences:

>Translated_297_residues
MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN
LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE
RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF
KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID
>Mature_297_residues
MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGYSQEFALKVVDAVKQKLNMPN
LKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVSFSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSE
RLLRKMNQDKNMGMNIISAKDHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF
KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID

Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=66.4206642066421, Blast_Score=392, Evalue=1e-110,
Organism=Escherichia coli, GI1788228, Length=248, Percent_Identity=27.0161290322581, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787031, Length=268, Percent_Identity=27.6119402985075, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788649, Length=238, Percent_Identity=23.9495798319328, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 32425; Mature: 32425

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCC
SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVS
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH
FSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAK
HCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
DHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF
CCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHH
KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKVKKAALLLATLGLFTVGAQAQDAGTLKKIKDTGVISLGHRESSIPFSYYDDKQNVIGY
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCC
SQEFALKVVDAVKQKLNMPNLKVKLTPVTSQNRIPLVQNGTVDLECGSTTNNAERQQQVS
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHHHHH
FSNTIFVIGTRLMTKKDSGVKDWADLKGKTVVTTAGTTSERLLRKMNQDKNMGMNIISAK
HCCEEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
DHGESFLTLSTGRAAAFMMDDALLAGERAKSNNPGDFVIVGAPQSHEAYGCMLRKNDPEF
CCCCEEEEEECCCEEEEEEHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCHHH
KKVVDDAIAKVETSGEASQIYKKWFESPIPPKGLNLAFPESDDMKALYKAPNDKAID
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]