| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hemH
Identifier: 186477251
GI number: 186477251
Start: 2812729
End: 2813799
Strand: Reverse
Name: hemH
Synonym: Bphy_2502
Alternate gene names: 186477251
Gene position: 2813799-2812729 (Counterclockwise)
Preceding gene: 186477252
Following gene: 186477250
Centisome position: 80.88
GC content: 64.52
Gene sequence:
>1071_bases ATGCGCTTCGACCTCGAGCGGCCCTTGCAGTCTGCTGCGGCACATCGCGTCGCCGTGTTGCTGATCAATCTCGGCACGCC CGATGCGCCGACGCCCCGTGCCGTGCGGCGCTACCTCGCGCAGTTTCTGTCCGATCCGCGTGTGGTCGAGATCCCGTCGC TGGTGTGGCAAATCATCTTGCGCCTTTTCATTCTGCCGTTTCGCGGCGTGGCCTCGGCGAAGAAATACGCGTCGGTGTGG ATGCCCGAAGGCTCGCCGTTGCGGGTGCACACGCAAAAGCAGGTCGAAGGGCTGCGGCATCTGCTGCATCTGAACGACTA CACGGTGATCGTGGAGTACGCGATGCGCTACGGCACGCCCGACATTCCCGCCATGCTCAACCAGTTGAAGCTGGCGGGCG CCGAGCGCATCCTGCTGATGCCGATGTACCCGCAGTATTCGGCGTCCACGACGGCCACTGCGTTCGACGCAGCATTTGTG GCGCTCAGGCGGATGCGCAATCAGCCCGAAATCCGCACCGTGCGCCAGTACGCGGATCACCCCGCATACATCGCGGCGCT CGCGGCGCAGGTCAATCACTACTGGCATGCACACGGCCGTCCCGACTTCGCGGCGGGCGACAAGCTGGTGTTGAGTTTTC ACGGCGTGCCCAAGCGCACGCTGGACCTGGGCGATCCATATCACGATCAATGTCAACAAACTGCGACGCTGCTGATGCAT GCGCTCGGGCTGACGTCCGTCGAATGCCGCGTGACGTTTCAGTCGCGCTTCGGCAAGGCCGAGTGGCTTCAGCCTTACAC GGCGCCCACGCTCAAGGAACTGGGTGCGGCGGGGGTGCATCGCGCGGACGTGTTCTGCCCGGGCTTCACGGCGGACTGTC TGGAGACGATCGAGGAAATCGGCATGGAAGTGCGCGACGAGTTCCTGCACGCAGGCGGGAAAGTTTTTCACGCCATTCCC TGCCTGAACGCGGCGCCGGCGTGGATCGCGGCGCTCGGCGAAATCGTCGCGCAGCATCTGCAGGGCTGGCCGGTTCAGGC AGCGACCCCGCAAAGCGCGTCTGTGGCTTGA
Upstream 100 bases:
>100_bases CAATTGGCCGAACGGCCAGGTATCGCCGGCAGACCGCGCCGCTATAATGGGCTTCCCGTCCATTACGTGTCGCGCCTGTG CGCGGCTCTTGTCTTTGCCT
Downstream 100 bases:
>100_bases ATTTGCGCATCCGGCACACAACCTGCATCCGTACAACGGCGCATGGCATCCCTTAGGCGTGTGCAGACACCTGAAGAAGG ACTGATGAACTACAGGATTT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRFDLERPLQSAAAHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPSLVWQIILRLFILPFRGVASAKKYASVW MPEGSPLRVHTQKQVEGLRHLLHLNDYTVIVEYAMRYGTPDIPAMLNQLKLAGAERILLMPMYPQYSASTTATAFDAAFV ALRRMRNQPEIRTVRQYADHPAYIAALAAQVNHYWHAHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTATLLMH ALGLTSVECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVHRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKVFHAIP CLNAAPAWIAALGEIVAQHLQGWPVQAATPQSASVA
Sequences:
>Translated_356_residues MRFDLERPLQSAAAHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPSLVWQIILRLFILPFRGVASAKKYASVW MPEGSPLRVHTQKQVEGLRHLLHLNDYTVIVEYAMRYGTPDIPAMLNQLKLAGAERILLMPMYPQYSASTTATAFDAAFV ALRRMRNQPEIRTVRQYADHPAYIAALAAQVNHYWHAHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTATLLMH ALGLTSVECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVHRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKVFHAIP CLNAAPAWIAALGEIVAQHLQGWPVQAATPQSASVA >Mature_356_residues MRFDLERPLQSAAAHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPSLVWQIILRLFILPFRGVASAKKYASVW MPEGSPLRVHTQKQVEGLRHLLHLNDYTVIVEYAMRYGTPDIPAMLNQLKLAGAERILLMPMYPQYSASTTATAFDAAFV ALRRMRNQPEIRTVRQYADHPAYIAALAAQVNHYWHAHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTATLLMH ALGLTSVECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVHRADVFCPGFTADCLETIEEIGMEVRDEFLHAGGKVFHAIP CLNAAPAWIAALGEIVAQHLQGWPVQAATPQSASVA
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=270, Percent_Identity=27.037037037037, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI60499021, Length=269, Percent_Identity=27.1375464684015, Blast_Score=92, Evalue=5e-19, Organism=Escherichia coli, GI1786681, Length=324, Percent_Identity=45.9876543209877, Blast_Score=271, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6324750, Length=354, Percent_Identity=24.0112994350282, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI17864156, Length=350, Percent_Identity=24.5714285714286, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24651774, Length=270, Percent_Identity=24.0740740740741, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_BURP8 (B2JGE7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858721.1 - GeneID: 6243986 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2502 - HOGENOM: HBG697135 - OMA: TIEEIGM - ProtClustDB: PRK00035 - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - InterPro: IPR019772 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 39514; Mature: 39514
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFDLERPLQSAAAHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPSLVWQIIL CCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RLFILPFRGVASAKKYASVWMPEGSPLRVHTQKQVEGLRHLLHLNDYTVIVEYAMRYGTP HHHHHCCCCHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DIPAMLNQLKLAGAERILLMPMYPQYSASTTATAFDAAFVALRRMRNQPEIRTVRQYADH CHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIAALAAQVNHYWHAHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTATLLMH HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLTSVECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVHRADVFCPGFTADCLETIEEI HHCCCCEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHAGGKVFHAIPCLNAAPAWIAALGEIVAQHLQGWPVQAATPQSASVA HHHHHHHHHHCCCHHEEHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFDLERPLQSAAAHRVAVLLINLGTPDAPTPRAVRRYLAQFLSDPRVVEIPSLVWQIIL CCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH RLFILPFRGVASAKKYASVWMPEGSPLRVHTQKQVEGLRHLLHLNDYTVIVEYAMRYGTP HHHHHCCCCHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCC DIPAMLNQLKLAGAERILLMPMYPQYSASTTATAFDAAFVALRRMRNQPEIRTVRQYADH CHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PAYIAALAAQVNHYWHAHGRPDFAAGDKLVLSFHGVPKRTLDLGDPYHDQCQQTATLLMH HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH ALGLTSVECRVTFQSRFGKAEWLQPYTAPTLKELGAAGVHRADVFCPGFTADCLETIEEI HHCCCCEEEEEEEHHHCCCHHHCCCCCCHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHH GMEVRDEFLHAGGKVFHAIPCLNAAPAWIAALGEIVAQHLQGWPVQAATPQSASVA HHHHHHHHHHCCCHHEEHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA