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The map label for this gene is hslR [H]

Identifier: 186477250

GI number: 186477250

Start: 2812237

End: 2812686

Strand: Reverse

Name: hslR [H]

Synonym: Bphy_2501

Alternate gene names: 186477250

Gene position: 2812686-2812237 (Counterclockwise)

Preceding gene: 186477251

Following gene: 186477248

Centisome position: 80.84

GC content: 64.44

Gene sequence:

>450_bases
ATGGCATCCCTTAGGCGTGTGCAGACACCTGAAGAAGGACTGATGAACTACAGGATTTCTACGGAACCGGGCGCTCGCTT
GCGCATCGACAAATGGCTGTGGGCGGCGCGTTTCTTCAAGACGCGTTCGCTGGCCGCCGATGCTGTCGAGAAGGGCCGCG
TGCGGATCGGCGGCGCGACGGTGAAGCCGGCCAAGGAAGTGCGGGTCGGCGACCTCGTCGAGATCGACATCGAGCGGATC
GTGTGGCAGATCGAGGTGCTCGGCGTGTGCGACGTGCGCGGGCCGGCGAGCGTCGCGCAGACGCTTTACGCGGAAACGCA
AGAAGGCAGGCAGAAGCGCCTGCAGGAGAACGAGCGGCGCAAGACCTATCGCGAGCCGGCCGCCAGCATGCATGGGCGGC
CGACCAAGCGCGACAGGCGCGTTATCGACAAAATTTCCAGTGGGGGTTGA

Upstream 100 bases:

>100_bases
GCATCTGCAGGGCTGGCCGGTTCAGGCAGCGACCCCGCAAAGCGCGTCTGTGGCTTGAATTTGCGCATCCGGCACACAAC
CTGCATCCGTACAACGGCGC

Downstream 100 bases:

>100_bases
AGAGTTCCTCGATGGTCGCGTGAACGCCGCCGTATTCGGTCGTGCGTTCGTTGACTACCCCGGACATGCAGATGGTCGTG
GTGCCCGCGACGAGTACCAA

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MASLRRVQTPEEGLMNYRISTEPGARLRIDKWLWAARFFKTRSLAADAVEKGRVRIGGATVKPAKEVRVGDLVEIDIERI
VWQIEVLGVCDVRGPASVAQTLYAETQEGRQKRLQENERRKTYREPAASMHGRPTKRDRRVIDKISSGG

Sequences:

>Translated_149_residues
MASLRRVQTPEEGLMNYRISTEPGARLRIDKWLWAARFFKTRSLAADAVEKGRVRIGGATVKPAKEVRVGDLVEIDIERI
VWQIEVLGVCDVRGPASVAQTLYAETQEGRQKRLQENERRKTYREPAASMHGRPTKRDRRVIDKISSGG
>Mature_148_residues
ASLRRVQTPEEGLMNYRISTEPGARLRIDKWLWAARFFKTRSLAADAVEKGRVRIGGATVKPAKEVRVGDLVEIDIERIV
WQIEVLGVCDVRGPASVAQTLYAETQEGRQKRLQENERRKTYREPAASMHGRPTKRDRRVIDKISSGG

Specific function: May play a important role in binding of nucleic acid. More specific for RNA [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=133, Percent_Identity=36.0902255639098, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 16916; Mature: 16784

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLRRVQTPEEGLMNYRISTEPGARLRIDKWLWAARFFKTRSLAADAVEKGRVRIGGAT
CCCCCCCCCCHHHHHEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
VKPAKEVRVGDLVEIDIERIVWQIEVLGVCDVRGPASVAQTLYAETQEGRQKRLQENERR
CCCHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTYREPAASMHGRPTKRDRRVIDKISSGG
HHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASLRRVQTPEEGLMNYRISTEPGARLRIDKWLWAARFFKTRSLAADAVEKGRVRIGGAT
CCCCCCCCCHHHHHEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
VKPAKEVRVGDLVEIDIERIVWQIEVLGVCDVRGPASVAQTLYAETQEGRQKRLQENERR
CCCHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KTYREPAASMHGRPTKRDRRVIDKISSGG
HHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]