Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yqjD [C]

Identifier: 186477189

GI number: 186477189

Start: 2743460

End: 2743762

Strand: Direct

Name: yqjD [C]

Synonym: Bphy_2440

Alternate gene names: 186477189

Gene position: 2743460-2743762 (Clockwise)

Preceding gene: 186477187

Following gene: 186477190

Centisome position: 78.85

GC content: 59.41

Gene sequence:

>303_bases
ATGTCGGAAGTCAACAAGGAGAGATTGATGTCGGATATCAAAACCGTACTCGCAGACGCGGAAGATCTGTTGAAGCAGGC
CGCGAGCGCCACTGGCGAACGCGCTTCTGAACTGCGCGAGACGGCGCTCTCGCGTCTCAAGCAGGCGAAGGAAAAGGCAG
CCGACGTGCAGGTCGTGGTCGTCGAGAAAGGCAAGAAAGCCGCTCGCGCCACCGACGACTATGTCCACGAACATCCGTGG
GCGTCGATCGGCATTGCAGCCGGTGTGGGCGTGCTGGTTGGCCTGCTGATCAATCGCAAGTAA

Upstream 100 bases:

>100_bases
CGCGCGATTTGCGCGTAACCCATGCGCACGGTCCGCTGGCTCGCCAGCGGCCGTTTCTTTGGTTACGATTCACGCGTAGC
GTGCACGAAGGGAGCAGTCA

Downstream 100 bases:

>100_bases
TGCGCGCGAAGCCCCGGCCGCGCATTCGGGCGGCCGGCGTACTTCGCTGACAGGCGGACGGGCGCGCGCGCCCTGTCCGC
ACCTTCCTCGCGCATCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSEVNKERLMSDIKTVLADAEDLLKQAASATGERASELRETALSRLKQAKEKAADVQVVVVEKGKKAARATDDYVHEHPW
ASIGIAAGVGVLVGLLINRK

Sequences:

>Translated_100_residues
MSEVNKERLMSDIKTVLADAEDLLKQAASATGERASELRETALSRLKQAKEKAADVQVVVVEKGKKAARATDDYVHEHPW
ASIGIAAGVGVLVGLLINRK
>Mature_99_residues
SEVNKERLMSDIKTVLADAEDLLKQAASATGERASELRETALSRLKQAKEKAADVQVVVVEKGKKAARATDDYVHEHPWA
SIGIAAGVGVLVGLLINRK

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789485, Length=101, Percent_Identity=29.7029702970297, Blast_Score=59, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10766; Mature: 10635

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVNKERLMSDIKTVLADAEDLLKQAASATGERASELRETALSRLKQAKEKAADVQVVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
VEKGKKAARATDDYVHEHPWASIGIAAGVGVLVGLLINRK
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEVNKERLMSDIKTVLADAEDLLKQAASATGERASELRETALSRLKQAKEKAADVQVVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
VEKGKKAARATDDYVHEHPWASIGIAAGVGVLVGLLINRK
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA