| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477190
Identifier: 186477190
GI number: 186477190
Start: 2743882
End: 2744265
Strand: Direct
Name: 186477190
Synonym: Bphy_2441
Alternate gene names: NA
Gene position: 2743882-2744265 (Clockwise)
Preceding gene: 186477189
Following gene: 186477191
Centisome position: 78.87
GC content: 58.33
Gene sequence:
>384_bases ATGATCGACACACAATCGCAGAGCGGGGACCGCGGACCACTGCGGCGCATTCTCAGTTCGTTCTTTTCGATCCTGCAGAC ACGGCTGGAACTCATCGGCATCGAACTGGCCGAAGAAAAAGACCGGCTGCTGATGGTTCTGTTCATGGGCCTCGCTGCCA TGATGCTCGCGACAATGGCCCTGATCGCGCTGACTGCGCTGGTCGCGATCGCGTTCTGGGACACGTATCGTTGGCAGGCA CTCGCGGGCATTACCCTCGTCTATGCGATCCTCGCGATCGTCTGTGCGCTGAGAGCGCGCAGCGGCTTGCATAATGCACC GATGATCTTCGAAGCGACGCTTCACGAGTTCGAGAAAGACCGCGAGATTTTCCGCAAACACTGA
Upstream 100 bases:
>100_bases GCGCATTCGGGCGGCCGGCGTACTTCGCTGACAGGCGGACGGGCGCGCGCGCCCTGTCCGCACCTTCCTCGCGCATCCTC GCGCGCAACACGCTGACGCC
Downstream 100 bases:
>100_bases ACCGGGCGTCGTTCTCTTCCCTGTCCATCCATCGATAACTTCATGAGCCAGGTCCATTCCGATAACGCATTTCGCAGCCG CCGACCGACCTCCAAAGATC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MIDTQSQSGDRGPLRRILSSFFSILQTRLELIGIELAEEKDRLLMVLFMGLAAMMLATMALIALTALVAIAFWDTYRWQA LAGITLVYAILAIVCALRARSGLHNAPMIFEATLHEFEKDREIFRKH
Sequences:
>Translated_127_residues MIDTQSQSGDRGPLRRILSSFFSILQTRLELIGIELAEEKDRLLMVLFMGLAAMMLATMALIALTALVAIAFWDTYRWQA LAGITLVYAILAIVCALRARSGLHNAPMIFEATLHEFEKDREIFRKH >Mature_127_residues MIDTQSQSGDRGPLRRILSSFFSILQTRLELIGIELAEEKDRLLMVLFMGLAAMMLATMALIALTALVAIAFWDTYRWQA LAGITLVYAILAIVCALRARSGLHNAPMIFEATLHEFEKDREIFRKH
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14354; Mature: 14354
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTQSQSGDRGPLRRILSSFFSILQTRLELIGIELAEEKDRLLMVLFMGLAAMMLATMA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALTALVAIAFWDTYRWQALAGITLVYAILAIVCALRARSGLHNAPMIFEATLHEFEKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH REIFRKH HHHHHCC >Mature Secondary Structure MIDTQSQSGDRGPLRRILSSFFSILQTRLELIGIELAEEKDRLLMVLFMGLAAMMLATMA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALTALVAIAFWDTYRWQALAGITLVYAILAIVCALRARSGLHNAPMIFEATLHEFEKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH REIFRKH HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA