| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yfkF [H]
Identifier: 186477182
GI number: 186477182
Start: 2735347
End: 2736504
Strand: Direct
Name: yfkF [H]
Synonym: Bphy_2433
Alternate gene names: 186477182
Gene position: 2735347-2736504 (Clockwise)
Preceding gene: 186477181
Following gene: 186477185
Centisome position: 78.62
GC content: 67.96
Gene sequence:
>1158_bases ATGAAAGTCGTCTTCTCCCGTGATTTCCTCGCGCTGATCCTGAGCGTGGCCGTCGTCGGCCTCGGCAGCGGCGCGACGCT TCCTCTCACTGCCCTCGCGCTGACGCAGGCGGGCTACGGCACCGACGTGGTCGGCCTGCTGACGGCCGCGCAGGCGGGCG GCGGCCTGCTGGTGGTGCCCGTCGCCGGCTGGATCGCGGCGCGCTGCGGCGGCCGTCACGCGATCATCGGCTCGGTGCTG GTCGTCGCAATCGCCACCGCGCTGATGCAGGTGAGCGCCAATCTGTTCGTCTGGGGCGTGCTGCGCGTGCTGTGCGGCGT GGCGCTGATGCTGCTCTTCACGATCGGCGAGGCATGGGTCAACCAGCTCGCCGACGATGCATCGCGAGGCCGCGTCGTCG CCATCTACGCAACGAACTTCACGCTGTTCCAGATGGCAGGCCCCGTGCTCGTCAGTCAGATCGCGCAGTACGACGATTGG CGCTTCCTGATTTGCGGCGCGATCTTTCTGATCGCGTTGCCCGTGCTGTCGATGATCCGCTCCGCGCCTCACGCATCCGA CGAACATGAGCCGCATGGCAACTGGCGCCGCGTGCTGCCGCAGATGCCTGCGCTCGTGGTCGGGACCGGCTTTTTCGCGC TGTTCGATACCATCGCGCTGTCGCTGATGCCGCTCTTCGCGATGGCGCATGGCATGTCCAGTGAAGTGGCCGTGCTGTTC GCGTCAGCGCTGCTGCTCGGCGACACGACGATGCAGTTTCCCATCGGCTGGCTCGCGGATCACCTGGGGCGCGAGCGTGT GCATATCGGCTGCGCGGTGCTCGTCGTCGTGTTGCTGCCGCTGCTGCCTTGGGCCGTGCAGTCACCGTGGCTGTGCTGGC CGCTGCTGTATGTGCTGGGCGCGGCGGCGGGCGCGATCTACACGCTGTCGCTCGTGGCCTGCGGCGAGCGCTTTCGCGGT GTGGCGCTGGTGTCGGCGAGCTCGCTCGTCGGTGCGTCGTGGAGTATCGCGAGTTTCGGCGGGCCGCTCGTAGCGGGCGC CTTGATGAAGAGCGTCGGCAACGACGCGATGATCGGCGTCGTGCTCGCGAGCGCGTTGGCGTTTCTCGCGGCGATGCTGT GGGAAAAAAGACGCGGCGTGGCGCGCGCCGCGTCCTGA
Upstream 100 bases:
>100_bases GGCGTTTGCGTGCAGCGGGCTGAGCGGCCAATCGCGCATGGCCGTCATCAGAGAGCCCCGATGATGCCAATGACAGACGG GCGGTGTAGCATCTCGCCCG
Downstream 100 bases:
>100_bases TTTCGCGGGCGATTCAGCGCTGCGCCGGCACGATCTCGCCGACGCACGTGCCAAAGCCGACGCGATAGCCGTCGCCCTGG CACCATCCGGCGAGCGTGAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS
Sequences:
>Translated_385_residues MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS >Mature_385_residues MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40273; Mature: 40273
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVP CCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE VAGWIAARCGGRHAIIGSVLVVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDWRFLICGAIFLIALPVLSMIR HHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLG HHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAAGAIYTLSLVACGERFRGVALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGV HHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH VLASALAFLAAMLWEKRRGVARAAS HHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVP CCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE VAGWIAARCGGRHAIIGSVLVVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDWRFLICGAIFLIALPVLSMIR HHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLG HHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAAGAIYTLSLVACGERFRGVALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGV HHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH VLASALAFLAAMLWEKRRGVARAAS HHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]