Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ydhP [H]

Identifier: 186477181

GI number: 186477181

Start: 2734112

End: 2735269

Strand: Direct

Name: ydhP [H]

Synonym: Bphy_2432

Alternate gene names: 186477181

Gene position: 2734112-2735269 (Clockwise)

Preceding gene: 186477180

Following gene: 186477182

Centisome position: 78.58

GC content: 67.01

Gene sequence:

>1158_bases
ATGCCTTTGCCCCTGCTCGCACTCGCCGTCGCTGCGTTTGGAATCGGTACCACCGAGTTCGTCATCATGGGGCTGCTGCC
CGATGTCGCGCGCGATCTGGGCGTGTCGATCCCGGCCGCGGGGATGCTGGTGTCGGCGTATGCGCTCGGCGTGACGATCG
GCGCGCCGATCGTTGCGCTCGCGGTCGCCAACATGCCGCGCAAGAAGGCGCTGATGTGTCTGATCGGCATCTTCATTTTC
GGCAATCTGCTGTGCGCGATCGCGCCGGGCTATGCGGTGCTGATGGCCGCGCGCATCGTGACCGCGTTCTGCCACGGTGC
GTTTTTCGGCATCGGTTCCGTCGTCGCCGCCGGGCTTGTTGCGCCGAACCGCCGCGCGCAGGCGATCGCGCTGATGTTCA
CGGGTCTCACGCTTGCCAACGTGCTCGGCGTGCCGCTCGGCACTGCGCTTGGCCAGGCCGTCGGCTGGCGCGCGACCTTC
TGGGCAGTGACGGTTATCGGCGTGCTGGCGGCCGTCGCGCTCGCGCTTTGTCTGCCGCCGAAGATCGAGATGCAGAAAGC
CAGCCTCATCCACGAGTTCACGGTGCTGAAGAACCCGCAGGTGCTGATGGTGCTCGGCACGAGTGTCCTCGCGTCTGCAA
GCCTGTTCTCGACCTTCACCTACATCACGCCGATTCTCGAAGACGTGACGGGCTTCACGCCGCACGCCGTGACGATGGTG
CTGCTGCTGTTCGGGCTCGGGCTGACCGTGGGCAGCACGCTCGGCGGCAAGCTCGCCGACTGGCGCCCCGTGCAGTCCCT
GCTGTCGTTCCTGCTCGCGATCGTCGCGATCCTGTCGATCTTCGCGATGACGATGCACAGCGAAATCCCCGCGATGGTCA
CCATCTTCCTGTGGGGCGTCCTCGCGTTCGCGATCGTGCCGCCGCTGCAGATGCTGATCGTCGATCGTGCAAGCAGTGCA
CCGAATCTGGCCTCGACGCTCAACCAGGGTGCGTTCAATCTCGGCAATGCGACGGGTGCGTGGCTCGGCGGCATGGCGAT
CGGCGCAGGCGCGCCGCTCACGTCCCTGCCGTGGATCGGCGTCGCGACGGCGGCGGGCGCGGTGGCGCTGACGTGGTGGT
CGGTGTCGCTCGACGGGCGTTTGCGTGCAGCGGGCTGA

Upstream 100 bases:

>100_bases
GATTTACGCTTGCCGACGTCTGCGTACTCATCCCGAACGCGCGCGACGGCAACACGTGCGGCGCTTCCTTCCGCCGCGCC
TCTCTCGCAAAAGTCCCATC

Downstream 100 bases:

>100_bases
GCGGCCAATCGCGCATGGCCGTCATCAGAGAGCCCCGATGATGCCAATGACAGACGGGCGGTGTAGCATCTCGCCCGATG
AAAGTCGTCTTCTCCCGTGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSAYALGVTIGAPIVALAVANMPRKKALMCLIGIFIF
GNLLCAIAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATF
WAVTVIGVLAAVALALCLPPKIEMQKASLIHEFTVLKNPQVLMVLGTSVLASASLFSTFTYITPILEDVTGFTPHAVTMV
LLLFGLGLTVGSTLGGKLADWRPVQSLLSFLLAIVAILSIFAMTMHSEIPAMVTIFLWGVLAFAIVPPLQMLIVDRASSA
PNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTSLPWIGVATAAGAVALTWWSVSLDGRLRAAG

Sequences:

>Translated_385_residues
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSAYALGVTIGAPIVALAVANMPRKKALMCLIGIFIF
GNLLCAIAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATF
WAVTVIGVLAAVALALCLPPKIEMQKASLIHEFTVLKNPQVLMVLGTSVLASASLFSTFTYITPILEDVTGFTPHAVTMV
LLLFGLGLTVGSTLGGKLADWRPVQSLLSFLLAIVAILSIFAMTMHSEIPAMVTIFLWGVLAFAIVPPLQMLIVDRASSA
PNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTSLPWIGVATAAGAVALTWWSVSLDGRLRAAG
>Mature_384_residues
PLPLLALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSAYALGVTIGAPIVALAVANMPRKKALMCLIGIFIFG
NLLCAIAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFW
AVTVIGVLAAVALALCLPPKIEMQKASLIHEFTVLKNPQVLMVLGTSVLASASLFSTFTYITPILEDVTGFTPHAVTMVL
LLFGLGLTVGSTLGGKLADWRPVQSLLSFLLAIVAILSIFAMTMHSEIPAMVTIFLWGVLAFAIVPPLQMLIVDRASSAP
NLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTSLPWIGVATAAGAVALTWWSVSLDGRLRAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=371, Percent_Identity=48.5175202156334, Blast_Score=300, Evalue=1e-82,
Organism=Escherichia coli, GI1786595, Length=353, Percent_Identity=33.9943342776204, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI1787808, Length=382, Percent_Identity=30.3664921465969, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI145693198, Length=347, Percent_Identity=27.3775216138329, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39513; Mature: 39382

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSAYALGVTIGAPIVAL
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVANMPRKKALMCLIGIFIFGNLLCAIAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFWAVTVIGVLAAVALALCLPP
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
KIEMQKASLIHEFTVLKNPQVLMVLGTSVLASASLFSTFTYITPILEDVTGFTPHAVTMV
CCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLFGLGLTVGSTLGGKLADWRPVQSLLSFLLAIVAILSIFAMTMHSEIPAMVTIFLWGV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAFAIVPPLQMLIVDRASSAPNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTSLPWIG
HHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
VATAAGAVALTWWSVSLDGRLRAAG
HHHHCCCEEEEEEEEEECCEEECCC
>Mature Secondary Structure 
PLPLLALAVAAFGIGTTEFVIMGLLPDVARDLGVSIPAAGMLVSAYALGVTIGAPIVAL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVANMPRKKALMCLIGIFIFGNLLCAIAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFWAVTVIGVLAAVALALCLPP
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
KIEMQKASLIHEFTVLKNPQVLMVLGTSVLASASLFSTFTYITPILEDVTGFTPHAVTMV
CCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLFGLGLTVGSTLGGKLADWRPVQSLLSFLLAIVAILSIFAMTMHSEIPAMVTIFLWGV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAFAIVPPLQMLIVDRASSAPNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTSLPWIG
HHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH
VATAAGAVALTWWSVSLDGRLRAAG
HHHHCCCEEEEEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]