Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477185

Identifier: 186477185

GI number: 186477185

Start: 2739336

End: 2740208

Strand: Direct

Name: 186477185

Synonym: Bphy_2436

Alternate gene names: NA

Gene position: 2739336-2740208 (Clockwise)

Preceding gene: 186477182

Following gene: 186477187

Centisome position: 78.73

GC content: 60.48

Gene sequence:

>873_bases
ATGCGGCGTGCGCCGCGACACCAGTCCGCTCTCCACGTATTCATGATCCCGCTGACCATCCCCGAACTCGTCGAACGCGC
CTCCACTCACCCTTTTCTCGGCGAGCATCTAAGAATGGGCACCGGCCCGCGCAGCGGCGAGGCCATAGCGACATACGGCG
ATGTCGAAATCGGCAGCAGCTACGAGCCGATCTTTGACATTTCGGTGCATGCGCTCGCGCAGTCGTTGTCGTCGTCGCCG
GACAGTGCGGACCGTTTCGGCGACGAGCTCGGAGTCCAGGCGGTCACGCAACTGGCCGACGGCACGCCGCTCGACGCGTT
CGACCCGTTCGACCACGTGCCCGACGACCAGCAACTCGTGGCGCTCGACCGTATGTCGCGCGCGATGCATTCGATTAATT
TCTTCGGCCGGCAGCGGCACGGCTTGCTGTTCCTGCGCGTGCATGAGCGGCTGCTGAAAAGTGTGCGCTATGACCACGGC
CGACATTTCTCGACGGTGCTCATGTCGTTTGGATTGAATCCGTCGCGGATAGTGATCGAGTTGCCGCCCGCCGCAGTCGC
GCACCGGACGTTTCTTGGTTATCTCACCAAGAGTTATCAGCACTATGGATTCAAGGTGGCCGGCAATCTGCCGAACGCGG
GGCAAATCCTGTCAGTGTCGGACATGGCTCGACTGGATTTCGTCAAGATGGACGCCGCGTCGGCGTTGCGCGATTCGATG
GTGAAGCCGTTGGTCAGCTATGCGAATCGGCTGAAAATACCGTTGATCTTCAATCGCGTGGCAACTGAAGCGCAGTTCGA
TCTTCTGCAGCAGTACGACGTGCGATTCGTACAAGGGCCGCTATTCGTCGTGCACGAGAATCGGACGGCCTGA

Upstream 100 bases:

>100_bases
AACGTAAACCCGGAGTCGAGCCGCGAGCGCCACACGAGCGGCGAAATCCATATCAGTATTTGGTGCATGGACGGGCAGCC
ACCGCTGCTACTATCGAACC

Downstream 100 bases:

>100_bases
GAATATTCAAGGACTGTCGCCCAGACGGCGCGCGAGTGCCTTCAGTCGCGGTGCGACCCGTTCCCGAAACACGCTCTCCC
CCATCGACGACGCCGGCCCG

Product: putative diguanylate phosphodiesterase

Products: NA

Alternate protein names: EAL Domain-Containing Protein; Signalling Protein EAL; Sensory Transduction Protein Kinase; EAL Domain Protein; Signal Transduction Protein Eal Domain; Signaling Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRRAPRHQSALHVFMIPLTIPELVERASTHPFLGEHLRMGTGPRSGEAIATYGDVEIGSSYEPIFDISVHALAQSLSSSP
DSADRFGDELGVQAVTQLADGTPLDAFDPFDHVPDDQQLVALDRMSRAMHSINFFGRQRHGLLFLRVHERLLKSVRYDHG
RHFSTVLMSFGLNPSRIVIELPPAAVAHRTFLGYLTKSYQHYGFKVAGNLPNAGQILSVSDMARLDFVKMDAASALRDSM
VKPLVSYANRLKIPLIFNRVATEAQFDLLQQYDVRFVQGPLFVVHENRTA

Sequences:

>Translated_290_residues
MRRAPRHQSALHVFMIPLTIPELVERASTHPFLGEHLRMGTGPRSGEAIATYGDVEIGSSYEPIFDISVHALAQSLSSSP
DSADRFGDELGVQAVTQLADGTPLDAFDPFDHVPDDQQLVALDRMSRAMHSINFFGRQRHGLLFLRVHERLLKSVRYDHG
RHFSTVLMSFGLNPSRIVIELPPAAVAHRTFLGYLTKSYQHYGFKVAGNLPNAGQILSVSDMARLDFVKMDAASALRDSM
VKPLVSYANRLKIPLIFNRVATEAQFDLLQQYDVRFVQGPLFVVHENRTA
>Mature_290_residues
MRRAPRHQSALHVFMIPLTIPELVERASTHPFLGEHLRMGTGPRSGEAIATYGDVEIGSSYEPIFDISVHALAQSLSSSP
DSADRFGDELGVQAVTQLADGTPLDAFDPFDHVPDDQQLVALDRMSRAMHSINFFGRQRHGLLFLRVHERLLKSVRYDHG
RHFSTVLMSFGLNPSRIVIELPPAAVAHRTFLGYLTKSYQHYGFKVAGNLPNAGQILSVSDMARLDFVKMDAASALRDSM
VKPLVSYANRLKIPLIFNRVATEAQFDLLQQYDVRFVQGPLFVVHENRTA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32406; Mature: 32406

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAPRHQSALHVFMIPLTIPELVERASTHPFLGEHLRMGTGPRSGEAIATYGDVEIGSS
CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCEEECCC
YEPIFDISVHALAQSLSSSPDSADRFGDELGVQAVTQLADGTPLDAFDPFDHVPDDQQLV
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
ALDRMSRAMHSINFFGRQRHGLLFLRVHERLLKSVRYDHGRHFSTVLMSFGLNPSRIVIE
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
LPPAAVAHRTFLGYLTKSYQHYGFKVAGNLPNAGQILSVSDMARLDFVKMDAASALRDSM
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
VKPLVSYANRLKIPLIFNRVATEAQFDLLQQYDVRFVQGPLFVVHENRTA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCC
>Mature Secondary Structure
MRRAPRHQSALHVFMIPLTIPELVERASTHPFLGEHLRMGTGPRSGEAIATYGDVEIGSS
CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEEEEECCEEECCC
YEPIFDISVHALAQSLSSSPDSADRFGDELGVQAVTQLADGTPLDAFDPFDHVPDDQQLV
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
ALDRMSRAMHSINFFGRQRHGLLFLRVHERLLKSVRYDHGRHFSTVLMSFGLNPSRIVIE
HHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEE
LPPAAVAHRTFLGYLTKSYQHYGFKVAGNLPNAGQILSVSDMARLDFVKMDAASALRDSM
CCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
VKPLVSYANRLKIPLIFNRVATEAQFDLLQQYDVRFVQGPLFVVHENRTA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA