| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477146
Identifier: 186477146
GI number: 186477146
Start: 2690088
End: 2691209
Strand: Reverse
Name: 186477146
Synonym: Bphy_2395
Alternate gene names: NA
Gene position: 2691209-2690088 (Counterclockwise)
Preceding gene: 186477147
Following gene: 186477144
Centisome position: 77.35
GC content: 57.49
Gene sequence:
>1122_bases ATGGGAACCGCAAAAGGTAGTGGCCGTCTACGGCTACCGAGTCAGTGCTTTTTCGCAGACCGACTGTGGGCCTGCTTGAC GATATGTGCGACTCTCGGGGGCTGCACATCCCTCGGCCCTACGACCATCGTGGCGGACCGTTTTGACTATAGCGCGGCGA TCGCCGACTCATGGAAACAGCAAACGCTTCTCAACATTGTCAAATTGCGCTACATGGATCTCCCTGTATTCGTAGACGTG GCGTCTGTTGTCAGCGGCTACTCACTGCAAACAGGCGTAACGTTGAACGGCACTGTCTCGACCGAGCGGGCAGTGCAAGG GAATTTCCTTGGGGCCGCCGTGCAGGGCGTTTATACCGACCGCCCCACCATCACCTATACGCCGACCACCGGACAAAATT TCGTGCATGGATTGATGGAGCCCATTGATCCCAAGAACATCTTTTTCATGCTTCAAAGTGGCTATGCTGCGGATCTCCTG CTTGGCATGGCGGTGGAATCGCTTAATGGCGTGCGCAACCGCTCGACGGCAGCCGGGTTGATGCGCGAGGCTGACCCGGA ATTCTTGCGGGCAATTGCGCTGATGCGCGAGGTTCAGGCCGCTGGTGCGTTCACGATGCGTGTGGAAGAGGACAAGGTTA AAGGCCCCACGGCTGTGATTCTCTTGAGGCACGACGGCATACCTTCCGACGTTCTGGACAAGATGACTGAGATTCGGCGA TTGTTAAGGATGCCGCCAACTCCTCAGCGGTTCACTCTCGTTTATTCGCCCGTGCACGGTGCCGATGACGAACTCACCGT CAACAGCCGCTCCATGCTGCAGATCATGGGCGCCTTTTCCAGCTATATGGACGTGCCGGAGGAGCACTTGAGGGACCATA GTGCCCTGCCTGCCGTCGCGCAATCCAACGGCGAAGCGCCAGGACCAATGCTTCACATCTACAGTGGACGGGACAGGCCA GGCGATGCATATGTGTCCGTGCGCTATCGCGGTTACTGGTTCTGGATTGAGCAAGGTGATCTGCGAACCAAGCGGGCTCT CAACGCCGTCATGCTGTTCTTCACACTTGCCAATACGGGCAGCAAGGAGCCGCTGCCGTTGATCACGATCCCTGCACAGT AG
Upstream 100 bases:
>100_bases AATGAGTAGCGAGGGAGCCGTCAGCCGGTCGGTGCCCGGTCGGCGGCACCGCTTTGACGGCAGAGGACGTCGAGGCCGAT CCGCGTCGGGAGGCGCATCG
Downstream 100 bases:
>100_bases CAAGCCGCCGGTACGAGCGTCGATGCCTGGATTGCAGCGGCCCTTGTTGCCGACCTCGCGAGCGTCAAAGCCAGACTGCG TTCGGTACCCGGCAGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MGTAKGSGRLRLPSQCFFADRLWACLTICATLGGCTSLGPTTIVADRFDYSAAIADSWKQQTLLNIVKLRYMDLPVFVDV ASVVSGYSLQTGVTLNGTVSTERAVQGNFLGAAVQGVYTDRPTITYTPTTGQNFVHGLMEPIDPKNIFFMLQSGYAADLL LGMAVESLNGVRNRSTAAGLMREADPEFLRAIALMREVQAAGAFTMRVEEDKVKGPTAVILLRHDGIPSDVLDKMTEIRR LLRMPPTPQRFTLVYSPVHGADDELTVNSRSMLQIMGAFSSYMDVPEEHLRDHSALPAVAQSNGEAPGPMLHIYSGRDRP GDAYVSVRYRGYWFWIEQGDLRTKRALNAVMLFFTLANTGSKEPLPLITIPAQ
Sequences:
>Translated_373_residues MGTAKGSGRLRLPSQCFFADRLWACLTICATLGGCTSLGPTTIVADRFDYSAAIADSWKQQTLLNIVKLRYMDLPVFVDV ASVVSGYSLQTGVTLNGTVSTERAVQGNFLGAAVQGVYTDRPTITYTPTTGQNFVHGLMEPIDPKNIFFMLQSGYAADLL LGMAVESLNGVRNRSTAAGLMREADPEFLRAIALMREVQAAGAFTMRVEEDKVKGPTAVILLRHDGIPSDVLDKMTEIRR LLRMPPTPQRFTLVYSPVHGADDELTVNSRSMLQIMGAFSSYMDVPEEHLRDHSALPAVAQSNGEAPGPMLHIYSGRDRP GDAYVSVRYRGYWFWIEQGDLRTKRALNAVMLFFTLANTGSKEPLPLITIPAQ >Mature_372_residues GTAKGSGRLRLPSQCFFADRLWACLTICATLGGCTSLGPTTIVADRFDYSAAIADSWKQQTLLNIVKLRYMDLPVFVDVA SVVSGYSLQTGVTLNGTVSTERAVQGNFLGAAVQGVYTDRPTITYTPTTGQNFVHGLMEPIDPKNIFFMLQSGYAADLLL GMAVESLNGVRNRSTAAGLMREADPEFLRAIALMREVQAAGAFTMRVEEDKVKGPTAVILLRHDGIPSDVLDKMTEIRRL LRMPPTPQRFTLVYSPVHGADDELTVNSRSMLQIMGAFSSYMDVPEEHLRDHSALPAVAQSNGEAPGPMLHIYSGRDRPG DAYVSVRYRGYWFWIEQGDLRTKRALNAVMLFFTLANTGSKEPLPLITIPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40919; Mature: 40787
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAKGSGRLRLPSQCFFADRLWACLTICATLGGCTSLGPTTIVADRFDYSAAIADSWKQ CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH QTLLNIVKLRYMDLPVFVDVASVVSGYSLQTGVTLNGTVSTERAVQGNFLGAAVQGVYTD HHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCEEECCCCCCCHHHCCCCHHHHHHEEECC RPTITYTPTTGQNFVHGLMEPIDPKNIFFMLQSGYAADLLLGMAVESLNGVRNRSTAAGL CCEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHH MREADPEFLRAIALMREVQAAGAFTMRVEEDKVKGPTAVILLRHDGIPSDVLDKMTEIRR HHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH LLRMPPTPQRFTLVYSPVHGADDELTVNSRSMLQIMGAFSSYMDVPEEHLRDHSALPAVA HHCCCCCCCEEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHH QSNGEAPGPMLHIYSGRDRPGDAYVSVRYRGYWFWIEQGDLRTKRALNAVMLFFTLANTG HCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC SKEPLPLITIPAQ CCCCCEEEEECCC >Mature Secondary Structure GTAKGSGRLRLPSQCFFADRLWACLTICATLGGCTSLGPTTIVADRFDYSAAIADSWKQ CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH QTLLNIVKLRYMDLPVFVDVASVVSGYSLQTGVTLNGTVSTERAVQGNFLGAAVQGVYTD HHHHHHHHHHHCCCHHHHHHHHHHCCCCEECCEEECCCCCCCHHHCCCCHHHHHHEEECC RPTITYTPTTGQNFVHGLMEPIDPKNIFFMLQSGYAADLLLGMAVESLNGVRNRSTAAGL CCEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHH MREADPEFLRAIALMREVQAAGAFTMRVEEDKVKGPTAVILLRHDGIPSDVLDKMTEIRR HHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHH LLRMPPTPQRFTLVYSPVHGADDELTVNSRSMLQIMGAFSSYMDVPEEHLRDHSALPAVA HHCCCCCCCEEEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHH QSNGEAPGPMLHIYSGRDRPGDAYVSVRYRGYWFWIEQGDLRTKRALNAVMLFFTLANTG HCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCC SKEPLPLITIPAQ CCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA