| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477147
Identifier: 186477147
GI number: 186477147
Start: 2691305
End: 2692720
Strand: Reverse
Name: 186477147
Synonym: Bphy_2396
Alternate gene names: NA
Gene position: 2692720-2691305 (Counterclockwise)
Preceding gene: 186477148
Following gene: 186477146
Centisome position: 77.4
GC content: 59.46
Gene sequence:
>1416_bases ATGGACAAGGTCGTTTCACACAAGGTCACTCACCTTAAACAGGCAAGCGCAGCCTATCGCACGCCCGATGAGAGAGCGGC GGTAGGGCGGGCCATCCGAACTAAGGTGCCACGTTCATCGCAGGCCGGCTGGATACCGCCGAAGAATCGGCGCGACCCCA TCGAGCTTTTAAACGAATCTAATAAAGGCCGCATTCCGAGCTTGGTTCCAATCCGCTTCGGCCGAATGTCGGAGTCACCA TTCGCGTTCTATCGTGGCGCGGCTGTCGTGATGGCGGCTGACCTGGCCTCGACCCCGACGAGCGGGTTGAGGGTGCAGGC TTGTGGGGACGCTCACCTGATGAATTTCGGCGGCTTCGCAACACCAGAACGCAACGTGATTTTCGACATCAACGATCTGG ACGAAACTCTCCCCGCGCCGTTTGAGTGGGATCTCAAGCGGCTCGCAGCCAGTGTAGTGATTGCGGCACAGCATCTCGCT CTGCCCGGAAGTGACGCCGCGCGCGTGGCCACAGATCTCGTCCGTGAATACCGGGAGCGCATGCACGACTACGCGGAGAT GCGCGTGCTCGATGTCTGGTACGACAGGATCGATCTGAAAAAATACGAAGACCGTTCGGGCGATCCGGCTGTCGTCGCCG AGATTCGCAAGCGGATTTCCGAGCGTATCGAGGTGGAACAGCGCAAGCAGGTGCCCGAGTACATGTATCCGAAGCTTGTT TCGCAGGAGGGGGCACAACCCAGAATCAAGGATGAGCCACCACTTATTGTCCACCCGACCGAAGAAACCGTGCCCGGCCT TAAAACGGACTACACCGAAGCTATCGTCTCATACCGCGAAAGCCTGGCCGAACATGTCCGCGTCCTGTTTGATAGATTCC ACCTAGTCGATCTGGCCCAGAAAGTCGTCGGCGTAGGCAGCGTCGGGACGCTGTGTGGCGTCGGCTTGTTCATGGCTGCG GACAATGACCCTCTCTTCCTGCAGGTAAAGGAAGCGCGAGCGTCGGTGCTCGAGCCCTACGCGGGCAAGAGCCTGCATTC GAATCACGGCCAGCGGGTGATCGCAGGCCAGCGCCTGATGCAGGCCGCGAGCGACGTGTTTCTTGGCTGGACCCGCGGAA AGAACGGGCGCGACTTCTTTGTTCGTCAGCTGCGCGACATGAAGATGTCTGCCATTATCGAGGATTGGGATACGGGGGTG CTGCGCCAGTATGGGCGCATGTGTGCGCACGCACTTGCCCGGGCACACGCCCGCTCGGGCGATGCCGCAATGATGGCCGC GTATATGGGGTCCGGCCAAACTTTCGATGACGCGATCACTGAGTTCGCGACTGAATACAGTTCCCAGAATCGCCAGGATC ATCGCGATTTCATCCAGGCCATTCGCGAAGGCCGGATTCCCGCCAAAACAGAATGA
Upstream 100 bases:
>100_bases AGGGTGGCGCCGCGCGATGAGCCAGCGGTGGATTTGACGGCACCCGCTACTTGACGGGCAGGTGCCAGTTGTCGCGAGCG GTTCAACTCGGGGTAAGGTT
Downstream 100 bases:
>100_bases GTAGCGAGGGAGCCGTCAGCCGGTCGGTGCCCGGTCGGCGGCACCGCTTTGACGGCAGAGGACGTCGAGGCCGATCCGCG TCGGGAGGCGCATCGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE
Sequences:
>Translated_471_residues MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE >Mature_471_residues MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52736; Mature: 52736
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNES CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC NKGRIPSLVPIRFGRMSESPFAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFA CCCCCCCCCCEECCCCCCCCHHHHCCCHHEEEHHHCCCCCCCCEEEECCCCCEECCCCCC TPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLALPGSDAARVATDLVREYRER CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQ HCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVGVGSVGTLCGVGLFMAADNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLM HHHCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH QAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGVLRQYGRMCAHALARAHARSG HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC DAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNES CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC NKGRIPSLVPIRFGRMSESPFAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFA CCCCCCCCCCEECCCCCCCCHHHHCCCHHEEEHHHCCCCCCCCEEEECCCCCEECCCCCC TPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLALPGSDAARVATDLVREYRER CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH MHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQ HCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVVGVGSVGTLCGVGLFMAADNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLM HHHCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH QAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGVLRQYGRMCAHALARAHARSG HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC DAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA