Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477147

Identifier: 186477147

GI number: 186477147

Start: 2691305

End: 2692720

Strand: Reverse

Name: 186477147

Synonym: Bphy_2396

Alternate gene names: NA

Gene position: 2692720-2691305 (Counterclockwise)

Preceding gene: 186477148

Following gene: 186477146

Centisome position: 77.4

GC content: 59.46

Gene sequence:

>1416_bases
ATGGACAAGGTCGTTTCACACAAGGTCACTCACCTTAAACAGGCAAGCGCAGCCTATCGCACGCCCGATGAGAGAGCGGC
GGTAGGGCGGGCCATCCGAACTAAGGTGCCACGTTCATCGCAGGCCGGCTGGATACCGCCGAAGAATCGGCGCGACCCCA
TCGAGCTTTTAAACGAATCTAATAAAGGCCGCATTCCGAGCTTGGTTCCAATCCGCTTCGGCCGAATGTCGGAGTCACCA
TTCGCGTTCTATCGTGGCGCGGCTGTCGTGATGGCGGCTGACCTGGCCTCGACCCCGACGAGCGGGTTGAGGGTGCAGGC
TTGTGGGGACGCTCACCTGATGAATTTCGGCGGCTTCGCAACACCAGAACGCAACGTGATTTTCGACATCAACGATCTGG
ACGAAACTCTCCCCGCGCCGTTTGAGTGGGATCTCAAGCGGCTCGCAGCCAGTGTAGTGATTGCGGCACAGCATCTCGCT
CTGCCCGGAAGTGACGCCGCGCGCGTGGCCACAGATCTCGTCCGTGAATACCGGGAGCGCATGCACGACTACGCGGAGAT
GCGCGTGCTCGATGTCTGGTACGACAGGATCGATCTGAAAAAATACGAAGACCGTTCGGGCGATCCGGCTGTCGTCGCCG
AGATTCGCAAGCGGATTTCCGAGCGTATCGAGGTGGAACAGCGCAAGCAGGTGCCCGAGTACATGTATCCGAAGCTTGTT
TCGCAGGAGGGGGCACAACCCAGAATCAAGGATGAGCCACCACTTATTGTCCACCCGACCGAAGAAACCGTGCCCGGCCT
TAAAACGGACTACACCGAAGCTATCGTCTCATACCGCGAAAGCCTGGCCGAACATGTCCGCGTCCTGTTTGATAGATTCC
ACCTAGTCGATCTGGCCCAGAAAGTCGTCGGCGTAGGCAGCGTCGGGACGCTGTGTGGCGTCGGCTTGTTCATGGCTGCG
GACAATGACCCTCTCTTCCTGCAGGTAAAGGAAGCGCGAGCGTCGGTGCTCGAGCCCTACGCGGGCAAGAGCCTGCATTC
GAATCACGGCCAGCGGGTGATCGCAGGCCAGCGCCTGATGCAGGCCGCGAGCGACGTGTTTCTTGGCTGGACCCGCGGAA
AGAACGGGCGCGACTTCTTTGTTCGTCAGCTGCGCGACATGAAGATGTCTGCCATTATCGAGGATTGGGATACGGGGGTG
CTGCGCCAGTATGGGCGCATGTGTGCGCACGCACTTGCCCGGGCACACGCCCGCTCGGGCGATGCCGCAATGATGGCCGC
GTATATGGGGTCCGGCCAAACTTTCGATGACGCGATCACTGAGTTCGCGACTGAATACAGTTCCCAGAATCGCCAGGATC
ATCGCGATTTCATCCAGGCCATTCGCGAAGGCCGGATTCCCGCCAAAACAGAATGA

Upstream 100 bases:

>100_bases
AGGGTGGCGCCGCGCGATGAGCCAGCGGTGGATTTGACGGCACCCGCTACTTGACGGGCAGGTGCCAGTTGTCGCGAGCG
GTTCAACTCGGGGTAAGGTT

Downstream 100 bases:

>100_bases
GTAGCGAGGGAGCCGTCAGCCGGTCGGTGCCCGGTCGGCGGCACCGCTTTGACGGCAGAGGACGTCGAGGCCGATCCGCG
TCGGGAGGCGCATCGATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP
FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA
LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV
SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA
DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV
LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE

Sequences:

>Translated_471_residues
MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP
FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA
LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV
SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA
DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV
LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE
>Mature_471_residues
MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNESNKGRIPSLVPIRFGRMSESP
FAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFATPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLA
LPGSDAARVATDLVREYRERMHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV
SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQKVVGVGSVGTLCGVGLFMAA
DNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLMQAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGV
LRQYGRMCAHALARAHARSGDAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE

Specific function: Unknown

COG id: COG4320

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52736; Mature: 52736

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNES
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC
NKGRIPSLVPIRFGRMSESPFAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFA
CCCCCCCCCCEECCCCCCCCHHHHCCCHHEEEHHHCCCCCCCCEEEECCCCCEECCCCCC
TPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLALPGSDAARVATDLVREYRER
CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQ
HCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVVGVGSVGTLCGVGLFMAADNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLM
HHHCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
QAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGVLRQYGRMCAHALARAHARSG
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
DAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE
CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDKVVSHKVTHLKQASAAYRTPDERAAVGRAIRTKVPRSSQAGWIPPKNRRDPIELLNES
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCC
NKGRIPSLVPIRFGRMSESPFAFYRGAAVVMAADLASTPTSGLRVQACGDAHLMNFGGFA
CCCCCCCCCCEECCCCCCCCHHHHCCCHHEEEHHHCCCCCCCCEEEECCCCCEECCCCCC
TPERNVIFDINDLDETLPAPFEWDLKRLAASVVIAAQHLALPGSDAARVATDLVREYRER
CCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MHDYAEMRVLDVWYDRIDLKKYEDRSGDPAVVAEIRKRISERIEVEQRKQVPEYMYPKLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SQEGAQPRIKDEPPLIVHPTEETVPGLKTDYTEAIVSYRESLAEHVRVLFDRFHLVDLAQ
HCCCCCCCCCCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVVGVGSVGTLCGVGLFMAADNDPLFLQVKEARASVLEPYAGKSLHSNHGQRVIAGQRLM
HHHCCCCHHHHHHHHHEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
QAASDVFLGWTRGKNGRDFFVRQLRDMKMSAIIEDWDTGVLRQYGRMCAHALARAHARSG
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
DAAMMAAYMGSGQTFDDAITEFATEYSSQNRQDHRDFIQAIREGRIPAKTE
CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA