| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is groES [H]
Identifier: 186477085
GI number: 186477085
Start: 2617578
End: 2617868
Strand: Reverse
Name: groES [H]
Synonym: Bphy_2334
Alternate gene names: 186477085
Gene position: 2617868-2617578 (Counterclockwise)
Preceding gene: 186477087
Following gene: 186477084
Centisome position: 75.24
GC content: 59.45
Gene sequence:
>291_bases ATGAACCTTCGTCCTTTGCATGATCGCGTGATCGTCAAGCGTCTGGATCAGGAAACCAAGACCGCATCGGGCATCGTGAT TCCCGACGCAGCCGCAGAAAAGCCGGATCAAGGCGAAGTGCTGGCTGTCGGCCCGGGCAAGCGTGACGACAAGGGCGCTC CCATTGCGCTCGACGTGAAGGTCGGCGACCGCGTCCTGTTCGGCAAGTACGCAGGCCAGACCGTCAAGGTCGACGGCAAC GAACTGCTGGTGATGCGCGAAGAAGACATCATGGCCGTTGTCAACAAGTAA
Upstream 100 bases:
>100_bases TTAGCACTCACCGCACGAGAGTGCTAACAACTTCGCCGGTTGGCGTCGCCAGCTGGCATATCTCAGCGTTCTTCAGTCCC AATCAAGAGAGGATCTATCC
Downstream 100 bases:
>100_bases GCACTTGTTACCGGTTCATTCTCACGAATTCAAGGAGTTAGAAGATGGCAGCTAAAGACGTCGTGTTCGGCGATTCCGCC CGTGCCAAGATGGTTGAAGG
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN ELLVMREEDIMAVVNK
Sequences:
>Translated_96_residues MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN ELLVMREEDIMAVVNK >Mature_96_residues MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN ELLVMREEDIMAVVNK
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=54.7368421052632, Blast_Score=96, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=41.4893617021277, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324594, Length=96, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=8e-17, Organism=Drosophila melanogaster, GI21356029, Length=91, Percent_Identity=45.0549450549451, Blast_Score=75, Evalue=9e-15, Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=44.4444444444444, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 10391; Mature: 10391
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVK CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE VGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVVNK ECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC >Mature Secondary Structure MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVK CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE VGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVVNK ECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA