Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477087

Identifier: 186477087

GI number: 186477087

Start: 2619651

End: 2620679

Strand: Reverse

Name: 186477087

Synonym: Bphy_2336

Alternate gene names: NA

Gene position: 2620679-2619651 (Counterclockwise)

Preceding gene: 186477088

Following gene: 186477085

Centisome position: 75.32

GC content: 67.06

Gene sequence:

>1029_bases
ATGTCTGCTGAAATGAGATCCATCCAACGGTTCCCGACACCTTGCACCCGTTGCGGTGGCATCCTCTATCACCACGTAGC
GTACTGTCCGTACTGCGGCGTGAGCGAACCGATCGGCAGCGCCCAGCGCAAGCGCGCGGAGGCGCCGTTGCGAGCCGTCG
TGAAGGAAGCGCCGCTTCCGGCCGTTGCCGCCAACGACGCGGACGAACCGCCTTCGCCCGAGATCATCTGGTCGGAGCTG
GCGGCTGCGCCGGCGACTGCGGGGAAACGGGTCGTGCAATGGCCGTTGCGGCGCATCGTGACGGCCGGCGTGGTCGCGCT
GGCCCTGATGCTTACGCTTGGTGGTGTCGCGTACCTGCGCTTCAGTGCGAGTCACCGCGACGCTAACGTTGTCGAGCCGA
TGACAGCAGGCGTGAATCGCGCGCACACATCGTTGGCATCGGGCGTACCGCCTGACGCCGATGCTCAACCGTCGCGCGCG
GGCGCCTATGCGCCTGCACCGAATACGCCCGTTGCAGCGAACCCCGGCTCTGCCTCCGCGCAGTACGGCAAGGGCGTGGC
TGCGGCGCTGAGCGATGCGCGCGCAAGTCTCGCCCAAAAGAATCTGACGGCGGCAAGGGCGGCAATTTCGGGAGTTCTCT
CAGTTGCGCCTCGCGATGCGGAAGCGCTGCGACTGCAAGGCGATATCTCGGACCGTGAGAGCGAGCGTGACGTGGCGTTG
CGTGTGGCTGCGGGCTGTGCGAACGACGCGCTGTGGACTTGCGTGGTCAAACAGGCGAACGTGGCGCTGGCCATCGATTC
CAGCAGCAAGGATGCACAGATTCTGCTCGAGCGCGCAATCGTATCGACGGGCTGGAGGCCGCTTTCAACCCACGCAGTGG
CGGCAGCGCCCAAGCCTGTGCGGCGCGATCCGCCGCGCCCCGTCGCGAAGAGCGCGCCGGCCATACCGACACTCCCGGCT
CTCCCAACTCTCCCGCCGCCCTTGCCGCCAGGCACCCCGGTGGATAACGCAGCAGCCGGGAACGGTTAG

Upstream 100 bases:

>100_bases
CAGCGGGTTTGGATCGCGAGTTCCGCCGACTCGATCGTTTGCATCAACTTCGATCCTGAGCATGTGGATGGCGTTACACA
TAACGGCTTGGGGTTCTGGC

Downstream 100 bases:

>100_bases
CGTGCAACCTGCCGTTCCGCGCGAACGGCCTGTCGTCCTTCAATCGTCCGTGCAACGGGAATACATAAACGGCCGGGTCA
GATATCCCAGTCCCACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSEL
AAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRA
GAYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL
RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPA
LPTLPPPLPPGTPVDNAAAGNG

Sequences:

>Translated_342_residues
MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSEL
AAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRA
GAYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL
RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPA
LPTLPPPLPPGTPVDNAAAGNG
>Mature_341_residues
SAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSELA
AAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAG
AYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVALR
VAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPAL
PTLPPPLPPGTPVDNAAAGNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35171; Mature: 35040

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLP
CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AVAANDADEPPSPEIIWSELAAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLR
EEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
FSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAGAYAPAPNTPVAANPGSASA
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHEEE
RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPV
EEECCCCCCHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC
RRDPPRPVAKSAPAIPTLPALPTLPPPLPPGTPVDNAAAGNG
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLP
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AVAANDADEPPSPEIIWSELAAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLR
EEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
FSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAGAYAPAPNTPVAANPGSASA
EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
QYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHEEE
RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPV
EEECCCCCCHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC
RRDPPRPVAKSAPAIPTLPALPTLPPPLPPGTPVDNAAAGNG
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA