| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477087
Identifier: 186477087
GI number: 186477087
Start: 2619651
End: 2620679
Strand: Reverse
Name: 186477087
Synonym: Bphy_2336
Alternate gene names: NA
Gene position: 2620679-2619651 (Counterclockwise)
Preceding gene: 186477088
Following gene: 186477085
Centisome position: 75.32
GC content: 67.06
Gene sequence:
>1029_bases ATGTCTGCTGAAATGAGATCCATCCAACGGTTCCCGACACCTTGCACCCGTTGCGGTGGCATCCTCTATCACCACGTAGC GTACTGTCCGTACTGCGGCGTGAGCGAACCGATCGGCAGCGCCCAGCGCAAGCGCGCGGAGGCGCCGTTGCGAGCCGTCG TGAAGGAAGCGCCGCTTCCGGCCGTTGCCGCCAACGACGCGGACGAACCGCCTTCGCCCGAGATCATCTGGTCGGAGCTG GCGGCTGCGCCGGCGACTGCGGGGAAACGGGTCGTGCAATGGCCGTTGCGGCGCATCGTGACGGCCGGCGTGGTCGCGCT GGCCCTGATGCTTACGCTTGGTGGTGTCGCGTACCTGCGCTTCAGTGCGAGTCACCGCGACGCTAACGTTGTCGAGCCGA TGACAGCAGGCGTGAATCGCGCGCACACATCGTTGGCATCGGGCGTACCGCCTGACGCCGATGCTCAACCGTCGCGCGCG GGCGCCTATGCGCCTGCACCGAATACGCCCGTTGCAGCGAACCCCGGCTCTGCCTCCGCGCAGTACGGCAAGGGCGTGGC TGCGGCGCTGAGCGATGCGCGCGCAAGTCTCGCCCAAAAGAATCTGACGGCGGCAAGGGCGGCAATTTCGGGAGTTCTCT CAGTTGCGCCTCGCGATGCGGAAGCGCTGCGACTGCAAGGCGATATCTCGGACCGTGAGAGCGAGCGTGACGTGGCGTTG CGTGTGGCTGCGGGCTGTGCGAACGACGCGCTGTGGACTTGCGTGGTCAAACAGGCGAACGTGGCGCTGGCCATCGATTC CAGCAGCAAGGATGCACAGATTCTGCTCGAGCGCGCAATCGTATCGACGGGCTGGAGGCCGCTTTCAACCCACGCAGTGG CGGCAGCGCCCAAGCCTGTGCGGCGCGATCCGCCGCGCCCCGTCGCGAAGAGCGCGCCGGCCATACCGACACTCCCGGCT CTCCCAACTCTCCCGCCGCCCTTGCCGCCAGGCACCCCGGTGGATAACGCAGCAGCCGGGAACGGTTAG
Upstream 100 bases:
>100_bases CAGCGGGTTTGGATCGCGAGTTCCGCCGACTCGATCGTTTGCATCAACTTCGATCCTGAGCATGTGGATGGCGTTACACA TAACGGCTTGGGGTTCTGGC
Downstream 100 bases:
>100_bases CGTGCAACCTGCCGTTCCGCGCGAACGGCCTGTCGTCCTTCAATCGTCCGTGCAACGGGAATACATAAACGGCCGGGTCA GATATCCCAGTCCCACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSEL AAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRA GAYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPA LPTLPPPLPPGTPVDNAAAGNG
Sequences:
>Translated_342_residues MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSEL AAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRA GAYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPA LPTLPPPLPPGTPVDNAAAGNG >Mature_341_residues SAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLPAVAANDADEPPSPEIIWSELA AAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLRFSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAG AYAPAPNTPVAANPGSASAQYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVALR VAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPVRRDPPRPVAKSAPAIPTLPAL PTLPPPLPPGTPVDNAAAGNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35171; Mature: 35040
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLP CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AVAANDADEPPSPEIIWSELAAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLR EEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE FSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAGAYAPAPNTPVAANPGSASA EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHEEE RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPV EEECCCCCCHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC RRDPPRPVAKSAPAIPTLPALPTLPPPLPPGTPVDNAAAGNG CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAEMRSIQRFPTPCTRCGGILYHHVAYCPYCGVSEPIGSAQRKRAEAPLRAVVKEAPLP CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AVAANDADEPPSPEIIWSELAAAPATAGKRVVQWPLRRIVTAGVVALALMLTLGGVAYLR EEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE FSASHRDANVVEPMTAGVNRAHTSLASGVPPDADAQPSRAGAYAPAPNTPVAANPGSASA EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QYGKGVAAALSDARASLAQKNLTAARAAISGVLSVAPRDAEALRLQGDISDRESERDVAL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCHHEEE RVAAGCANDALWTCVVKQANVALAIDSSSKDAQILLERAIVSTGWRPLSTHAVAAAPKPV EEECCCCCCHHHHHHEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCC RRDPPRPVAKSAPAIPTLPALPTLPPPLPPGTPVDNAAAGNG CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA