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The map label for this gene is cyt [H]

Identifier: 186476973

GI number: 186476973

Start: 2495580

End: 2495906

Strand: Direct

Name: cyt [H]

Synonym: Bphy_2222

Alternate gene names: 186476973

Gene position: 2495580-2495906 (Clockwise)

Preceding gene: 186476972

Following gene: 186476977

Centisome position: 71.73

GC content: 61.77

Gene sequence:

>327_bases
ATGAAATCGAAGTCGTATGCGGCATGCGTGCTGGCAGGCACTTTCGCGTTCACGGGCGCGGCACGCGCGGAACCGGCTCA
AGGGCTCGCACTTGCTCAGAAGCAGAACTGCATGAGTTGTCATTCGGTGACGCGGCAATTCATGGGACCGTCGCTCCACG
ATGTCGCCGCGAAATATGCGTCGCGCAGCGATGCCGTTCATTACCTCACACACAAGATTCTCGAAGGCAGCGCGGGCGTC
TGGGGACCCGTGCCGATGCCCGCGAACACCCAGCTCACGGCGGACGAGGCCACCTCGCTCGCAAGCTGGATCCTGACGCT
CAAGTAA

Upstream 100 bases:

>100_bases
CATGCGTCGATGGATAAAGGGGCACACGGATCGCCGTGTGCCCCTTTGCTCTTATAATGCGTCCACCACGAGCCGGCCCT
GGTCACCGGCGGAGACCACA

Downstream 100 bases:

>100_bases
CCGGTTGCGGTTTACTTACCCGTCGCCGAGTTGCCGAGTTCTTCGCGGATCGCCTCGCGAACCCAGCGCAGCATCTCCGT
TTCCAGCGCGAGCGCGACTT

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKSKSYAACVLAGTFAFTGAARAEPAQGLALAQKQNCMSCHSVTRQFMGPSLHDVAAKYASRSDAVHYLTHKILEGSAGV
WGPVPMPANTQLTADEATSLASWILTLK

Sequences:

>Translated_108_residues
MKSKSYAACVLAGTFAFTGAARAEPAQGLALAQKQNCMSCHSVTRQFMGPSLHDVAAKYASRSDAVHYLTHKILEGSAGV
WGPVPMPANTQLTADEATSLASWILTLK
>Mature_108_residues
MKSKSYAACVLAGTFAFTGAARAEPAQGLALAQKQNCMSCHSVTRQFMGPSLHDVAAKYASRSDAVHYLTHKILEGSAGV
WGPVPMPANTQLTADEATSLASWILTLK

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11411; Mature: 11411

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKSYAACVLAGTFAFTGAARAEPAQGLALAQKQNCMSCHSVTRQFMGPSLHDVAAKYA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRSDAVHYLTHKILEGSAGVWGPVPMPANTQLTADEATSLASWILTLK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKSYAACVLAGTFAFTGAARAEPAQGLALAQKQNCMSCHSVTRQFMGPSLHDVAAKYA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SRSDAVHYLTHKILEGSAGVWGPVPMPANTQLTADEATSLASWILTLK
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]