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The map label for this gene is lptF [H]

Identifier: 186476977

GI number: 186476977

Start: 2498894

End: 2500006

Strand: Direct

Name: lptF [H]

Synonym: Bphy_2226

Alternate gene names: 186476977

Gene position: 2498894-2500006 (Clockwise)

Preceding gene: 186476973

Following gene: 186476978

Centisome position: 71.82

GC content: 62.8

Gene sequence:

>1113_bases
ATGATTTTTGAACGCTCTCTCCAGCGCGAACTGGCGTACACGGCTGGTGCCGTGTTCATGGTTTTGCTCACGCTGGTTCT
GACGACGATGATGATCCGCATCGTCGGCTTCGCGGCGTCCGGTGAAATCGACCCGCGCGACGTGCTCGTCCTGATCGGCC
TCACGGTCATCGGCTATCTCGCGATCATGCTGGTCGCGACGCTGTTCGTGTCGATCCTGTTCGTGCTCACCCGCTGGTAC
AAAGATTCCGAAATGGTCGTGTGGCTCGCCTCGGGCGTGAGCCTCGCGCGCTTCATCAGGCCGATCGGCGTGTTCGCGAC
GCCCATCATCATTCTGATCGCCTTCTTCGTGTTCGTCGGCTGGCCGTGGTCGAACCAGCAGAGCAAGCTGATCCGCGCGC
GCTTCCAGCAACGCGACGAGGTCTCGCTGCTCGCGCCGGGCCAGTTCCGCGAATCGGCCGCGAGCCATCGCGTGTTCTTC
ATCGAGAAGATGTCGCCCGATCAGGGCCACGTCGAGAACGTGTTCGTCACGAGCACGGAGAACGGCAAGGTCAACGTGGT
CGTGTCGAAGAACGGCCATACGGAAACGCACAAGAACGGCGACCGCTTCGTGGTGCTCGAAAACGGCCGCCGCTATGACG
GCGAGCCGGGCCATCCCGACTTCCGCATCATGGAGTTCGAGCGCTACGGCGTGAAGATCCAGAGCCAGCCGGTGGTCAGC
ACGCCGACCACGACGGGCACACCGACGCTCGACCTGTTCCGCGACCCGACCCGCCAGAATCTCGCCGAATTCGCGTGGCG
CGCGGGCCTGCCCCTGATCGCGATCAATCTGATGCTGCTCGCGATTCCCCTCGCGCACCAGAATCCGCGCCGCAGCCGCA
CCATCAATCTCGTGATGGCCGTGCTGATCTATCTGACCTATTCGAACCTGCTGAACGTCGTGCAGTCGTGGATCGAGCAA
GGCAAGATGTCTTTCGGCGTCGGCCTCGTGGGACTGCATATTCTCGTTGCGCTGATCGTCGTGTTCATTTTCTGGCTGCG
GGTGCGCAACCGGCCGCTCTTCACGCGAGCCATGTTCAGCCGCCCGGCTGACCGCTCGACGCAGGGGGCGTGA

Upstream 100 bases:

>100_bases
AAGCCGCAATTATCCGCTATTTTTCCCGCGGCGGCTGCACGAAAGGCGTGAGGGGCCCCAACCCCGCCGTCTACGGAAGC
GCGCCCTCTGCTCATCAACC

Downstream 100 bases:

>100_bases
CCGATGCGCATCTATGAAAAGTATTTCGCGCGTCAGGTCTACCTCACGTTCGTCTTCATCCTGTTCGCGTTCTCAGGTCT
GTTCTTCTTCTTCGATCTGA

Product: permease YjgP/YjgQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFF
IEKMSPDQGHVENVFVTSTENGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS
TPTTTGTPTLDLFRDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFGVGLVGLHILVALIVVFIFWLRVRNRPLFTRAMFSRPADRSTQGA

Sequences:

>Translated_370_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFF
IEKMSPDQGHVENVFVTSTENGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS
TPTTTGTPTLDLFRDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFGVGLVGLHILVALIVVFIFWLRVRNRPLFTRAMFSRPADRSTQGA
>Mature_370_residues
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYLAIMLVATLFVSILFVLTRWY
KDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVGWPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFF
IEKMSPDQGHVENVFVTSTENGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS
TPTTTGTPTLDLFRDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTINLVMAVLIYLTYSNLLNVVQSWIEQ
GKMSFGVGLVGLHILVALIVVFIFWLRVRNRPLFTRAMFSRPADRSTQGA

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=366, Percent_Identity=30.6010928961749, Blast_Score=122, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 41726; Mature: 41726

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIMLVATLFVSILFVLTRWYKDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECC
NGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS
CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHCEEEECCCCCC
TPTTTGTPTLDLFRDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTINLVMA
CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQSWIEQGKMSFGVGLVGLHILVALIVVFIFWLRVRNRPLFTRAMFS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
RPADRSTQGA
CCCCCCCCCC
>Mature Secondary Structure
MIFERSLQRELAYTAGAVFMVLLTLVLTTMMIRIVGFAASGEIDPRDVLVLIGLTVIGYL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
AIMLVATLFVSILFVLTRWYKDSEMVVWLASGVSLARFIRPIGVFATPIIILIAFFVFVG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPWSNQQSKLIRARFQQRDEVSLLAPGQFRESAASHRVFFIEKMSPDQGHVENVFVTSTE
CCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECC
NGKVNVVVSKNGHTETHKNGDRFVVLENGRRYDGEPGHPDFRIMEFERYGVKIQSQPVVS
CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEHHHCEEEECCCCCC
TPTTTGTPTLDLFRDPTRQNLAEFAWRAGLPLIAINLMLLAIPLAHQNPRRSRTINLVMA
CCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLIYLTYSNLLNVVQSWIEQGKMSFGVGLVGLHILVALIVVFIFWLRVRNRPLFTRAMFS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
RPADRSTQGA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]