| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is pcoA [H]
Identifier: 186476794
GI number: 186476794
Start: 2289840
End: 2291135
Strand: Reverse
Name: pcoA [H]
Synonym: Bphy_2040
Alternate gene names: 186476794
Gene position: 2291135-2289840 (Counterclockwise)
Preceding gene: 186476795
Following gene: 186476793
Centisome position: 65.85
GC content: 60.8
Gene sequence:
>1296_bases ATGGTCTCACGTCGAAATTTTCTCGGCGGCTCAGGGGCGGCGTTGCTCGGCGCGGCGTTGGTCAGCAAAGCTGGAGCGGC TGCACTTCCAGAAGCGCCAATCATGCAAAAGACGGCGACGCAGCCACCGCTTGTGCCGCCCAATGGTCGCCCCTATAGGC CGGTGGCCACGCTTAACGGGTGGACACTGCCCTGGCGGATGAAGAACGGCTGGAAGGAGTTTCACCTTATCGCCGAGCCG GTCGTTCGCGAAATGGCACCCGGCATGAAGGCGAATCTCTGGGGCTATAACGGCCAGGCACCAGGCCCGACCATCGAGGC GGTCGAAGGCGACAAGGTCCGCATCTTCGTCACCAACAAACTGCCTGAACACACCACTGTTCACTGGCACGGGATGCTCG TGCCGTCGGGGATGGACGGCGTGGGCGGTCTCACGCAACCGCACATCCCGCCCGGCAAGACATTCGTCTACGAGTTCCAG CTCGAAAAGCACGGCACTTTCATGTATCACCCGCATGCCGACGAGATGGTGCAGATGGCCATGGGGATGATGGGCACGTT CATCGTGCATCCGAAGGACGGCAGCGTCATGCAGGTGGACCGCGACTTCGTGTTCCTGATGTCCGCCTACGACATTGACC CAGGAAGTTTCACGCCACGCGTCAACGAAATGACGGACTTCAACATGTGGACGTGGAATGCGAGAGTTTTTCCTGGCGTC GACCCGCTGCCGGTACGCGCAGGAGACCGCGTTCGCATCCGCTTCGGCAATCTCACGATGACCAATCACCCCATTCATCT TCACGGGTACAGCTTCGAGGTCGCAGGAACCGACGGTGGATGGATTCCGCCTTCCGCTCGCTGGCCGGAAGTGACCGCCG ACGTTGCGGTCGGTCAGATGCGCGCCATCGAGTTCACGGCAAACCGGCCCGGTGACTGGGCGTTTCACTGCCACAAGTCG CATCACACGATGAATGCGATGGGGCATCAGGTCCCCAATCTGATTGGCGTGCAGCAGAAAGATCTGGCGAAACGTATCAA CAGACTTGTGCCGGACTACATGGCGATGGGCAGTTCCGGCGGCTCGATGGGCGAGATGGAGATGCCGCTACCGGACAACA CGCTACCGATGATGACGGGCACTGGGCCGTTTGGCGCGCTGGAAATGGGCGGCATGTTCACCGTGGTGAAAGTGCGTGAG GGACTCGGTCGCAACGATTACCGCGACCCGGGCTGGTTCAGACACCCAAAGGGAACCGTTGCGTACGAGTACACGGGTGA ACTGCCCGATAGCTGA
Upstream 100 bases:
>100_bases CTACTGCCGCACAGCGGGCACCGGCTCCGAGGCAGGACTCGCCGTTGCCCATTCCAGCGACGCGGCCCGCGTCGCCGATG AATTCAGAAGGTAAATGAAC
Downstream 100 bases:
>100_bases TTTCGTCGAAGGCCGGGCATGCACTCCAGCCGGGATTTTTCAATTCAACTGTGGGAGAGAGCGTAATGAAGAACGCGATT GTTTCGATTGTGATGGGCTG
Product: multicopper oxidase type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MVSRRNFLGGSGAALLGAALVSKAGAAALPEAPIMQKTATQPPLVPPNGRPYRPVATLNGWTLPWRMKNGWKEFHLIAEP VVREMAPGMKANLWGYNGQAPGPTIEAVEGDKVRIFVTNKLPEHTTVHWHGMLVPSGMDGVGGLTQPHIPPGKTFVYEFQ LEKHGTFMYHPHADEMVQMAMGMMGTFIVHPKDGSVMQVDRDFVFLMSAYDIDPGSFTPRVNEMTDFNMWTWNARVFPGV DPLPVRAGDRVRIRFGNLTMTNHPIHLHGYSFEVAGTDGGWIPPSARWPEVTADVAVGQMRAIEFTANRPGDWAFHCHKS HHTMNAMGHQVPNLIGVQQKDLAKRINRLVPDYMAMGSSGGSMGEMEMPLPDNTLPMMTGTGPFGALEMGGMFTVVKVRE GLGRNDYRDPGWFRHPKGTVAYEYTGELPDS
Sequences:
>Translated_431_residues MVSRRNFLGGSGAALLGAALVSKAGAAALPEAPIMQKTATQPPLVPPNGRPYRPVATLNGWTLPWRMKNGWKEFHLIAEP VVREMAPGMKANLWGYNGQAPGPTIEAVEGDKVRIFVTNKLPEHTTVHWHGMLVPSGMDGVGGLTQPHIPPGKTFVYEFQ LEKHGTFMYHPHADEMVQMAMGMMGTFIVHPKDGSVMQVDRDFVFLMSAYDIDPGSFTPRVNEMTDFNMWTWNARVFPGV DPLPVRAGDRVRIRFGNLTMTNHPIHLHGYSFEVAGTDGGWIPPSARWPEVTADVAVGQMRAIEFTANRPGDWAFHCHKS HHTMNAMGHQVPNLIGVQQKDLAKRINRLVPDYMAMGSSGGSMGEMEMPLPDNTLPMMTGTGPFGALEMGGMFTVVKVRE GLGRNDYRDPGWFRHPKGTVAYEYTGELPDS >Mature_431_residues MVSRRNFLGGSGAALLGAALVSKAGAAALPEAPIMQKTATQPPLVPPNGRPYRPVATLNGWTLPWRMKNGWKEFHLIAEP VVREMAPGMKANLWGYNGQAPGPTIEAVEGDKVRIFVTNKLPEHTTVHWHGMLVPSGMDGVGGLTQPHIPPGKTFVYEFQ LEKHGTFMYHPHADEMVQMAMGMMGTFIVHPKDGSVMQVDRDFVFLMSAYDIDPGSFTPRVNEMTDFNMWTWNARVFPGV DPLPVRAGDRVRIRFGNLTMTNHPIHLHGYSFEVAGTDGGWIPPSARWPEVTADVAVGQMRAIEFTANRPGDWAFHCHKS HHTMNAMGHQVPNLIGVQQKDLAKRINRLVPDYMAMGSSGGSMGEMEMPLPDNTLPMMTGTGPFGALEMGGMFTVVKVRE GLGRNDYRDPGWFRHPKGTVAYEYTGELPDS
Specific function: Required for the copper-inducible expression of copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=247, Percent_Identity=26.3157894736842, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6323703, Length=103, Percent_Identity=42.7184466019417, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321067, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI18859919, Length=109, Percent_Identity=40.3669724770642, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24650186, Length=95, Percent_Identity=40, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI28574104, Length=108, Percent_Identity=37.037037037037, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 47526; Mature: 47526
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRRNFLGGSGAALLGAALVSKAGAAALPEAPIMQKTATQPPLVPPNGRPYRPVATLNG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCC WTLPWRMKNGWKEFHLIAEPVVREMAPGMKANLWGYNGQAPGPTIEAVEGDKVRIFVTNK CEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCEEEEEEECC LPEHTTVHWHGMLVPSGMDGVGGLTQPHIPPGKTFVYEFQLEKHGTFMYHPHADEMVQMA CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCHHHHHHHH MGMMGTFIVHPKDGSVMQVDRDFVFLMSAYDIDPGSFTPRVNEMTDFNMWTWNARVFPGV HHHHEEEEEECCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCEECCCC DPLPVRAGDRVRIRFGNLTMTNHPIHLHGYSFEVAGTDGGWIPPSARWPEVTADVAVGQM CCCCCCCCCEEEEEECCEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHCCE RAIEFTANRPGDWAFHCHKSHHTMNAMGHQVPNLIGVQQKDLAKRINRLVPDYMAMGSSG EEEEEECCCCCCEEEEEECCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHCCCC GSMGEMEMPLPDNTLPMMTGTGPFGALEMGGMFTVVKVREGLGRNDYRDPGWFRHPKGTV CCCCEEECCCCCCCCCEEECCCCCCCEECCCEEEEEEEHHCCCCCCCCCCCCEECCCCCE AYEYTGELPDS EEEECCCCCCC >Mature Secondary Structure MVSRRNFLGGSGAALLGAALVSKAGAAALPEAPIMQKTATQPPLVPPNGRPYRPVATLNG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCC WTLPWRMKNGWKEFHLIAEPVVREMAPGMKANLWGYNGQAPGPTIEAVEGDKVRIFVTNK CEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCEEEEEEECC LPEHTTVHWHGMLVPSGMDGVGGLTQPHIPPGKTFVYEFQLEKHGTFMYHPHADEMVQMA CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCHHHHHHHH MGMMGTFIVHPKDGSVMQVDRDFVFLMSAYDIDPGSFTPRVNEMTDFNMWTWNARVFPGV HHHHEEEEEECCCCCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCEECCCC DPLPVRAGDRVRIRFGNLTMTNHPIHLHGYSFEVAGTDGGWIPPSARWPEVTADVAVGQM CCCCCCCCCEEEEEECCEEEECCCEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHCCE RAIEFTANRPGDWAFHCHKSHHTMNAMGHQVPNLIGVQQKDLAKRINRLVPDYMAMGSSG EEEEEECCCCCCEEEEEECCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHCCHHHHHCCCC GSMGEMEMPLPDNTLPMMTGTGPFGALEMGGMFTVVKVREGLGRNDYRDPGWFRHPKGTV CCCCEEECCCCCCCCCEEECCCCCCCEECCCEEEEEEEHHCCCCCCCCCCCCEECCCCCE AYEYTGELPDS EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8594334 [H]