Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476795

Identifier: 186476795

GI number: 186476795

Start: 2291138

End: 2292643

Strand: Reverse

Name: 186476795

Synonym: Bphy_2041

Alternate gene names: NA

Gene position: 2292643-2291138 (Counterclockwise)

Preceding gene: 186476796

Following gene: 186476794

Centisome position: 65.9

GC content: 61.75

Gene sequence:

>1506_bases
ATGATTCGATACGTCTGTCCGAACCGGGTGGCATGCATCGCTATCGCAACCACATTTCTCGCAGGCTGTACGACGTTCTC
CAAGGACGGAGGATTCAACGCCGTATCCACTACCGCGTCTGAGCGGCTTGGCAAGGATGCCGTCTACATCAAAACCGATG
AAGACCGCGACGCCGTTTTCAAGCGCACTCAGGAACTGCTGTCGAAGCCGCTCGGTATGGACGATGCCGTTCAGGTCGCG
CTGCTGAACAACCGGGGACTCCAGGCGTCGTACGCCGAACTCGGCATCGCCGAGGCCGACCTCGTGCAGGCGGGCCGTCT
GCCCAATCCGGGTTTTACCTTCAGCCGGACCCACTGGAGCGATGGCATCAGCATTAGCCGGACCTTCTCGATGGGTGTGC
TGGGCGTGCTCACGCTGCCGGTGGCGACGCGCATCGAGAGTCGCCGGTTTGAGCAAACGAAGCTCGAGGCTGCCAATGCG
ATGCTTGGCGTCGCTGCTGACGCTCGAAAAGCCTACGTCAACGCCGTAGCTGCGGCGCAGTCCGCCGTTTACGCCGCCCA
GGTCAAGGACTCGGCCGAAGCTGGCGCAGAGCTCGCGTTGCGCATGCGTCAGGCCGGCAGTTTCAGCAAGCTCGACTATG
CACGCGAGCAGGCTTTTTACGCCGAGTCGGTCGCGCAACTGGCCAAGGCCCGACAGCAGTCGGTCGTAGCCCGGGAGAAG
CTCACACGCACGATGGGCTTATGGGGCGCGGGAACCCAGTACACGTTGCCGGACCGTCTGCCTGACGTGCCGAAGGAGAG
GCCTCAACTGAATGAGGTCGAGAGCTTTGCGATGCAAAACCGCCTCGATATTCAGGCGGCGAAACTGAGAACACAGGGCG
TTGCAACTTCGTTGGGTCTGAGCAGGGCAACCCGGTTCGTCAATGCGCTGGATGTCGGATATCTCGACAACTTCGAGACG
GACAAGGGGCACGAGCACGGGTACGAAATCAGCGTTGAGATTCCCATCTTCGATTGGGGCAGCGCGAAAGTTGCACGGGC
CGAAGCTATCTACATGCAGTCGGCGAACCGGCTCGCCCAGACGGCGATCGATGCACGTTCCGAAGTTCGCGAGTCGTACG
CCGCGTACGTGACGAGCTACGACGTGGCCAGGCACTACCGCGATGAAGTCGTGCCTGTTCGCAAGACGATCTCCGACGAA
ATGCTGCTGCGCTACAACGGCATGCTGACAAGCGTATTCGAACTGCTCGCCGATTCGCGCGACCAGGTTGCGGCCGTCAA
CGGATATATCGACGCGCTGAAAGACTACTGGCTTGCGGAAACGGACTTGCAACAGTCGCTGGGCGGCCGGCTTCCGCCGC
TTGCAATGGCGCAGACGCCCGACGTACCGCGCAGTGCCGAAGCGCCAGCTACTGCCGCACAGCGGGCACCGGCTCCGAGG
CAGGACTCGCCGTTGCCCATTCCAGCGACGCGGCCCGCGTCGCCGATGAATTCAGAAGGTAAATGA

Upstream 100 bases:

>100_bases
CCGTCGCGCCCGGTCAGGGCAAGACTGGAACGAAGCACGGTCAACAAGCCGAGTCGCCACAAAAGGGAAAGAACGGGCAC
GACCACGGAGGCGATTCGAA

Downstream 100 bases:

>100_bases
ACATGGTCTCACGTCGAAATTTTCTCGGCGGCTCAGGGGCGGCGTTGCTCGGCGCGGCGTTGGTCAGCAAAGCTGGAGCG
GCTGCACTTCCAGAAGCGCC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MIRYVCPNRVACIAIATTFLAGCTTFSKDGGFNAVSTTASERLGKDAVYIKTDEDRDAVFKRTQELLSKPLGMDDAVQVA
LLNNRGLQASYAELGIAEADLVQAGRLPNPGFTFSRTHWSDGISISRTFSMGVLGVLTLPVATRIESRRFEQTKLEAANA
MLGVAADARKAYVNAVAAAQSAVYAAQVKDSAEAGAELALRMRQAGSFSKLDYAREQAFYAESVAQLAKARQQSVVAREK
LTRTMGLWGAGTQYTLPDRLPDVPKERPQLNEVESFAMQNRLDIQAAKLRTQGVATSLGLSRATRFVNALDVGYLDNFET
DKGHEHGYEISVEIPIFDWGSAKVARAEAIYMQSANRLAQTAIDARSEVRESYAAYVTSYDVARHYRDEVVPVRKTISDE
MLLRYNGMLTSVFELLADSRDQVAAVNGYIDALKDYWLAETDLQQSLGGRLPPLAMAQTPDVPRSAEAPATAAQRAPAPR
QDSPLPIPATRPASPMNSEGK

Sequences:

>Translated_501_residues
MIRYVCPNRVACIAIATTFLAGCTTFSKDGGFNAVSTTASERLGKDAVYIKTDEDRDAVFKRTQELLSKPLGMDDAVQVA
LLNNRGLQASYAELGIAEADLVQAGRLPNPGFTFSRTHWSDGISISRTFSMGVLGVLTLPVATRIESRRFEQTKLEAANA
MLGVAADARKAYVNAVAAAQSAVYAAQVKDSAEAGAELALRMRQAGSFSKLDYAREQAFYAESVAQLAKARQQSVVAREK
LTRTMGLWGAGTQYTLPDRLPDVPKERPQLNEVESFAMQNRLDIQAAKLRTQGVATSLGLSRATRFVNALDVGYLDNFET
DKGHEHGYEISVEIPIFDWGSAKVARAEAIYMQSANRLAQTAIDARSEVRESYAAYVTSYDVARHYRDEVVPVRKTISDE
MLLRYNGMLTSVFELLADSRDQVAAVNGYIDALKDYWLAETDLQQSLGGRLPPLAMAQTPDVPRSAEAPATAAQRAPAPR
QDSPLPIPATRPASPMNSEGK
>Mature_501_residues
MIRYVCPNRVACIAIATTFLAGCTTFSKDGGFNAVSTTASERLGKDAVYIKTDEDRDAVFKRTQELLSKPLGMDDAVQVA
LLNNRGLQASYAELGIAEADLVQAGRLPNPGFTFSRTHWSDGISISRTFSMGVLGVLTLPVATRIESRRFEQTKLEAANA
MLGVAADARKAYVNAVAAAQSAVYAAQVKDSAEAGAELALRMRQAGSFSKLDYAREQAFYAESVAQLAKARQQSVVAREK
LTRTMGLWGAGTQYTLPDRLPDVPKERPQLNEVESFAMQNRLDIQAAKLRTQGVATSLGLSRATRFVNALDVGYLDNFET
DKGHEHGYEISVEIPIFDWGSAKVARAEAIYMQSANRLAQTAIDARSEVRESYAAYVTSYDVARHYRDEVVPVRKTISDE
MLLRYNGMLTSVFELLADSRDQVAAVNGYIDALKDYWLAETDLQQSLGGRLPPLAMAQTPDVPRSAEAPATAAQRAPAPR
QDSPLPIPATRPASPMNSEGK

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54606; Mature: 54606

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYVCPNRVACIAIATTFLAGCTTFSKDGGFNAVSTTASERLGKDAVYIKTDEDRDAVF
CCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHH
KRTQELLSKPLGMDDAVQVALLNNRGLQASYAELGIAEADLVQAGRLPNPGFTFSRTHWS
HHHHHHHHCCCCCCHHEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
DGISISRTFSMGVLGVLTLPVATRIESRRFEQTKLEAANAMLGVAADARKAYVNAVAAAQ
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVYAAQVKDSAEAGAELALRMRQAGSFSKLDYAREQAFYAESVAQLAKARQQSVVAREK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRTMGLWGAGTQYTLPDRLPDVPKERPQLNEVESFAMQNRLDIQAAKLRTQGVATSLGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRATRFVNALDVGYLDNFETDKGHEHGYEISVEIPIFDWGSAKVARAEAIYMQSANRLAQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
TAIDARSEVRESYAAYVTSYDVARHYRDEVVPVRKTISDEMLLRYNGMLTSVFELLADSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
DQVAAVNGYIDALKDYWLAETDLQQSLGGRLPPLAMAQTPDVPRSAEAPATAAQRAPAPR
CCEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
QDSPLPIPATRPASPMNSEGK
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRYVCPNRVACIAIATTFLAGCTTFSKDGGFNAVSTTASERLGKDAVYIKTDEDRDAVF
CCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHH
KRTQELLSKPLGMDDAVQVALLNNRGLQASYAELGIAEADLVQAGRLPNPGFTFSRTHWS
HHHHHHHHCCCCCCHHEEEEEECCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC
DGISISRTFSMGVLGVLTLPVATRIESRRFEQTKLEAANAMLGVAADARKAYVNAVAAAQ
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVYAAQVKDSAEAGAELALRMRQAGSFSKLDYAREQAFYAESVAQLAKARQQSVVAREK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRTMGLWGAGTQYTLPDRLPDVPKERPQLNEVESFAMQNRLDIQAAKLRTQGVATSLGL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SRATRFVNALDVGYLDNFETDKGHEHGYEISVEIPIFDWGSAKVARAEAIYMQSANRLAQ
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
TAIDARSEVRESYAAYVTSYDVARHYRDEVVPVRKTISDEMLLRYNGMLTSVFELLADSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
DQVAAVNGYIDALKDYWLAETDLQQSLGGRLPPLAMAQTPDVPRSAEAPATAAQRAPAPR
CCEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
QDSPLPIPATRPASPMNSEGK
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA