| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ylcC [C]
Identifier: 186476793
GI number: 186476793
Start: 2289427
End: 2289774
Strand: Reverse
Name: ylcC [C]
Synonym: Bphy_2039
Alternate gene names: 186476793
Gene position: 2289774-2289427 (Counterclockwise)
Preceding gene: 186476794
Following gene: 186476792
Centisome position: 65.81
GC content: 56.61
Gene sequence:
>348_bases ATGAAGAACGCGATTGTTTCGATTGTGATGGGCTGTGCGGTGGCCGTTTCCACAACCGCCTTTGCGGCCGGCGATATGGG CAACATGAATATGGCGAGCGGCGCTCAACAGGGCGCGAGCGCGAAGAGCAGCATGTCGCACGGTGAGGTCAAGAAAGTCG ATGCCACCGCTGGGAAGCTGACCATCAAGCACGGTCCACTCGAGAACCTCGACATGGAAGCGATGACGATGGTGTTCAAG GTCAAGGATCCGGCCATGTTGTCGCAGGTGAAGGTCGGCGACAAGATTGACTTCGTCGCAGAGGAGATTGATGGCTCACT CACCGTGACGAAGCTGCAGAAGCAATAA
Upstream 100 bases:
>100_bases CGTACGAGTACACGGGTGAACTGCCCGATAGCTGATTTCGTCGAAGGCCGGGCATGCACTCCAGCCGGGATTTTTCAATT CAACTGTGGGAGAGAGCGTA
Downstream 100 bases:
>100_bases GCATCCAATGGGGTGCCGGACGACGAGAGCACCCGATTCAAACCAGAGAGGTAACAACCATGAACGCCTTGATGCGTCAC CCTACTGCTCGTGCAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKNAIVSIVMGCAVAVSTTAFAAGDMGNMNMASGAQQGASAKSSMSHGEVKKVDATAGKLTIKHGPLENLDMEAMTMVFK VKDPAMLSQVKVGDKIDFVAEEIDGSLTVTKLQKQ
Sequences:
>Translated_115_residues MKNAIVSIVMGCAVAVSTTAFAAGDMGNMNMASGAQQGASAKSSMSHGEVKKVDATAGKLTIKHGPLENLDMEAMTMVFK VKDPAMLSQVKVGDKIDFVAEEIDGSLTVTKLQKQ >Mature_115_residues MKNAIVSIVMGCAVAVSTTAFAAGDMGNMNMASGAQQGASAKSSMSHGEVKKVDATAGKLTIKHGPLENLDMEAMTMVFK VKDPAMLSQVKVGDKIDFVAEEIDGSLTVTKLQKQ
Specific function: Unknown
COG id: COG5569
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11992; Mature: 11992
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 8.7 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 8.7 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNAIVSIVMGCAVAVSTTAFAAGDMGNMNMASGAQQGASAKSSMSHGEVKKVDATAGKL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE TIKHGPLENLDMEAMTMVFKVKDPAMLSQVKVGDKIDFVAEEIDGSLTVTKLQKQ EEECCCCCCCCHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure MKNAIVSIVMGCAVAVSTTAFAAGDMGNMNMASGAQQGASAKSSMSHGEVKKVDATAGKL CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE TIKHGPLENLDMEAMTMVFKVKDPAMLSQVKVGDKIDFVAEEIDGSLTVTKLQKQ EEECCCCCCCCHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA