| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476627
Identifier: 186476627
GI number: 186476627
Start: 2131682
End: 2132281
Strand: Reverse
Name: 186476627
Synonym: Bphy_1872
Alternate gene names: NA
Gene position: 2132281-2131682 (Counterclockwise)
Preceding gene: 186476628
Following gene: 186476626
Centisome position: 61.29
GC content: 60.33
Gene sequence:
>600_bases ATGAGTGATCAGGTAGGAATTCTCGAACGCACCGCGCGGCGCGTTCTGCTGTCGCTCGCCCGCGCGCTGGTGACGACGGT GAATGACGCCGGCGGATTTCAGCGCGTGCAGGTGAAGCTAAACGCGCTGGAGACGGCAGACAACACGCCGCGCCCTGTCG AGTTCGGCCTCACGTCGAATCCGCCTGTTGGGTCGGACGCGTTTGTCGTGTTTCTGGGTGGCGATCGTTCGAACGGTGTC GTGCTCGGCACTGTGCACCAACCATCGCGCCCAAAGAACCTCGCGCCTGGCGAAACGATGCTCTATAGCCAGGACGGCAA AAACATTTATCTGACGGCATCTGGCGGGATCGTGGTCGACGCAAAGAATCAGGCTGTCACGGTCAACAACGCAACGACGG TGACGATCAACGCGGCGACCAAGGTCCGCATGGTGACGCCGCTGCTCGAGGTGACTGGCGACATCATCGATAACGCGGGC ACCAACACCCACAACATGTCGCAGATGCGGCAAATCTACAACACCCATACGCACGCGGTCGTCAACGTCCAAACAGGCGG CAGCACGATCAACACCAACGTACCGAGCGCTACGGAATGA
Upstream 100 bases:
>100_bases CTCATGCGGAACTGACGCTGATGGCGCCGGAAGCATTCACGCCGCAGCCGGTTCTCATCCAACCGCAATACGCAGACGTC ATCGGAACAGTCCCCCAGCA
Downstream 100 bases:
>100_bases CGGACACTTCGACAGTTTGGGACGTTGCGCATGGGCGCGGCGATTGGGTCGTCAATCCGACTACTCTCACGCAGACGCCT ATATCTGCAGCATCACCAAC
Product: phage baseplate assembly protein V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSDQVGILERTARRVLLSLARALVTTVNDAGGFQRVQVKLNALETADNTPRPVEFGLTSNPPVGSDAFVVFLGGDRSNGV VLGTVHQPSRPKNLAPGETMLYSQDGKNIYLTASGGIVVDAKNQAVTVNNATTVTINAATKVRMVTPLLEVTGDIIDNAG TNTHNMSQMRQIYNTHTHAVVNVQTGGSTINTNVPSATE
Sequences:
>Translated_199_residues MSDQVGILERTARRVLLSLARALVTTVNDAGGFQRVQVKLNALETADNTPRPVEFGLTSNPPVGSDAFVVFLGGDRSNGV VLGTVHQPSRPKNLAPGETMLYSQDGKNIYLTASGGIVVDAKNQAVTVNNATTVTINAATKVRMVTPLLEVTGDIIDNAG TNTHNMSQMRQIYNTHTHAVVNVQTGGSTINTNVPSATE >Mature_198_residues SDQVGILERTARRVLLSLARALVTTVNDAGGFQRVQVKLNALETADNTPRPVEFGLTSNPPVGSDAFVVFLGGDRSNGVV LGTVHQPSRPKNLAPGETMLYSQDGKNIYLTASGGIVVDAKNQAVTVNNATTVTINAATKVRMVTPLLEVTGDIIDNAGT NTHNMSQMRQIYNTHTHAVVNVQTGGSTINTNVPSATE
Specific function: Unknown
COG id: COG4384
COG function: function code S; Mu-like prophage protein gp45
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp45 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014462 - InterPro: IPR013046 - InterPro: IPR010688 [H]
Pfam domain/function: PF06890 Phage_Mu_Gp45 [H]
EC number: NA
Molecular weight: Translated: 21039; Mature: 20908
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQVGILERTARRVLLSLARALVTTVNDAGGFQRVQVKLNALETADNTPRPVEFGLTSN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCC PPVGSDAFVVFLGGDRSNGVVLGTVHQPSRPKNLAPGETMLYSQDGKNIYLTASGGIVVD CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEE AKNQAVTVNNATTVTINAATKVRMVTPLLEVTGDIIDNAGTNTHNMSQMRQIYNTHTHAV CCCCEEEECCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE VNVQTGGSTINTNVPSATE EEEECCCCEEECCCCCCCC >Mature Secondary Structure SDQVGILERTARRVLLSLARALVTTVNDAGGFQRVQVKLNALETADNTPRPVEFGLTSN CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCCC PPVGSDAFVVFLGGDRSNGVVLGTVHQPSRPKNLAPGETMLYSQDGKNIYLTASGGIVVD CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEE AKNQAVTVNNATTVTINAATKVRMVTPLLEVTGDIIDNAGTNTHNMSQMRQIYNTHTHAV CCCCEEEECCCEEEEEECCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE VNVQTGGSTINTNVPSATE EEEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]