Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476626

Identifier: 186476626

GI number: 186476626

Start: 2130468

End: 2131685

Strand: Reverse

Name: 186476626

Synonym: Bphy_1871

Alternate gene names: NA

Gene position: 2131685-2130468 (Counterclockwise)

Preceding gene: 186476627

Following gene: 186476625

Centisome position: 61.27

GC content: 59.28

Gene sequence:

>1218_bases
ATGACGGACACTTCGACAGTTTGGGACGTTGCGCATGGGCGCGGCGATTGGGTCGTCAATCCGACTACTCTCACGCAGAC
GCCTATATCTGCAGCATCACCAACGCTGTTTGGTGTTGGCGATGGACTGGCGACACAGTTCCCGCTCGTTCCAGGCTCAA
GCCAGATCAGCAACATCGTTGCCCAGATCTACCGCAACGACTGGCAAGGCAACCAGTTGCTGTATGCGACGGCGCGGACG
AACTATCTGAAGCAGTCGCGGTTTTTTAGCGGATGGTCTACTGTCGCATCGGGAAGCGCGACTGCCGCCATTACGCCGGC
CTCGGCGAATGGTCCGGATGGAACGGTAAATTCTGCGGCCAGAGTCGTGTATTCGGCGACATCTGCTGGGCAAATTCCGA
TTGTGCGCATGGGAATTTCTATTCCCAACGGTGTGCCGATGTCGCCGAGCGTATGGGTGCTCGCGACGACCAGCATGACG
CTCACATTGCGCTCGCCCGCTGCGAGCACGACGAATATTGCGGTCACTGGGTCGAATGCGTGGCAACGCCTCTCGCTGCC
AGCCAGCCTCACGGGCAGTACGTTTTACAACTTCGACATTGGGTATGGTGCCAGCCAGCCCGGCGCGACAATCTATGTCG
ATTGCGGGCAAATGGAGGAATCTTCAGCGGTGGGAGTCGGCGCGACCAGCTACATCCCCACCACCACCGCTGCGGTGACG
GTGACGGATTATGCGCTGTCTCCGTATGGACTCGTCACCCTCGCAAGTGCACCTCTGCTCGGCGCGTCACTCACGTGGAC
CGGTAGCTACCTGCTCAACACGGTTTCAATCGGTGGCGATGTTGAGACCGGCAATGACCTTGAAACGGCCATTTTGATAA
GTCTGTTCACAGACAGGATAGCCGCGCCAGATGACGTTATTCCTGACGGCACGAACGATCCTCGCGGCTGGTGGGGCGAT
GCCGGCGAGACGGTCAATATCGGCTCGCGGCTCTGGCTTCTGACGCGAGCAAAGCAGACGCAGGAAACGTTGCAACGCGC
CTACGACTACATCGTTGAGGCGCTGCAATGGATGATCGACGACGGCGTCGTCGCCAAGTTCGACGTGCTGGTCGAGTGGA
CCAAGGCAAGCGAGCTCGGCGCGCAGGTCGTCGCATACAAACAGGACGGCTCGACGTCGGCAACCGCCTATACGTGGGCA
TGGCAGGGGATTAACTGA

Upstream 100 bases:

>100_bases
TGTCGCAGATGCGGCAAATCTACAACACCCATACGCACGCGGTCGTCAACGTCCAAACAGGCGGCAGCACGATCAACACC
AACGTACCGAGCGCTACGGA

Downstream 100 bases:

>100_bases
TGCCGTTTTCCAGACCGACACTGACGGACCTTCAGACGCAGGTCGCATCCGACATCGCGTCGAGCGTGCCTGGCTCCGAT
CCGCTACTGCGCTTTTCGAA

Product: GP46 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MTDTSTVWDVAHGRGDWVVNPTTLTQTPISAASPTLFGVGDGLATQFPLVPGSSQISNIVAQIYRNDWQGNQLLYATART
NYLKQSRFFSGWSTVASGSATAAITPASANGPDGTVNSAARVVYSATSAGQIPIVRMGISIPNGVPMSPSVWVLATTSMT
LTLRSPAASTTNIAVTGSNAWQRLSLPASLTGSTFYNFDIGYGASQPGATIYVDCGQMEESSAVGVGATSYIPTTTAAVT
VTDYALSPYGLVTLASAPLLGASLTWTGSYLLNTVSIGGDVETGNDLETAILISLFTDRIAAPDDVIPDGTNDPRGWWGD
AGETVNIGSRLWLLTRAKQTQETLQRAYDYIVEALQWMIDDGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATAYTWA
WQGIN

Sequences:

>Translated_405_residues
MTDTSTVWDVAHGRGDWVVNPTTLTQTPISAASPTLFGVGDGLATQFPLVPGSSQISNIVAQIYRNDWQGNQLLYATART
NYLKQSRFFSGWSTVASGSATAAITPASANGPDGTVNSAARVVYSATSAGQIPIVRMGISIPNGVPMSPSVWVLATTSMT
LTLRSPAASTTNIAVTGSNAWQRLSLPASLTGSTFYNFDIGYGASQPGATIYVDCGQMEESSAVGVGATSYIPTTTAAVT
VTDYALSPYGLVTLASAPLLGASLTWTGSYLLNTVSIGGDVETGNDLETAILISLFTDRIAAPDDVIPDGTNDPRGWWGD
AGETVNIGSRLWLLTRAKQTQETLQRAYDYIVEALQWMIDDGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATAYTWA
WQGIN
>Mature_404_residues
TDTSTVWDVAHGRGDWVVNPTTLTQTPISAASPTLFGVGDGLATQFPLVPGSSQISNIVAQIYRNDWQGNQLLYATARTN
YLKQSRFFSGWSTVASGSATAAITPASANGPDGTVNSAARVVYSATSAGQIPIVRMGISIPNGVPMSPSVWVLATTSMTL
TLRSPAASTTNIAVTGSNAWQRLSLPASLTGSTFYNFDIGYGASQPGATIYVDCGQMEESSAVGVGATSYIPTTTAAVTV
TDYALSPYGLVTLASAPLLGASLTWTGSYLLNTVSIGGDVETGNDLETAILISLFTDRIAAPDDVIPDGTNDPRGWWGDA
GETVNIGSRLWLLTRAKQTQETLQRAYDYIVEALQWMIDDGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATAYTWAW
QGIN

Specific function: Unknown

COG id: COG4381

COG function: function code S; Mu-like prophage protein gp46

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp46 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010877 [H]

Pfam domain/function: PF07409 GP46 [H]

EC number: NA

Molecular weight: Translated: 42687; Mature: 42556

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSTVWDVAHGRGDWVVNPTTLTQTPISAASPTLFGVGDGLATQFPLVPGSSQISNIV
CCCCCCEEEHHCCCCCEEECCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AQIYRNDWQGNQLLYATARTNYLKQSRFFSGWSTVASGSATAAITPASANGPDGTVNSAA
HHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCE
RVVYSATSAGQIPIVRMGISIPNGVPMSPSVWVLATTSMTLTLRSPAASTTNIAVTGSNA
EEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCC
WQRLSLPASLTGSTFYNFDIGYGASQPGATIYVDCGQMEESSAVGVGATSYIPTTTAAVT
CEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
VTDYALSPYGLVTLASAPLLGASLTWTGSYLLNTVSIGGDVETGNDLETAILISLFTDRI
EEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
AAPDDVIPDGTNDPRGWWGDAGETVNIGSRLWLLTRAKQTQETLQRAYDYIVEALQWMID
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
DGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATAYTWAWQGIN
CCCEEEEEEEEEECCHHCCCCEEEEEECCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
TDTSTVWDVAHGRGDWVVNPTTLTQTPISAASPTLFGVGDGLATQFPLVPGSSQISNIV
CCCCCEEEHHCCCCCEEECCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
AQIYRNDWQGNQLLYATARTNYLKQSRFFSGWSTVASGSATAAITPASANGPDGTVNSAA
HHHHHCCCCCCEEEEEECCCCHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCE
RVVYSATSAGQIPIVRMGISIPNGVPMSPSVWVLATTSMTLTLRSPAASTTNIAVTGSNA
EEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCC
WQRLSLPASLTGSTFYNFDIGYGASQPGATIYVDCGQMEESSAVGVGATSYIPTTTAAVT
CEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
VTDYALSPYGLVTLASAPLLGASLTWTGSYLLNTVSIGGDVETGNDLETAILISLFTDRI
EEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHC
AAPDDVIPDGTNDPRGWWGDAGETVNIGSRLWLLTRAKQTQETLQRAYDYIVEALQWMID
CCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
DGVVAKFDVLVEWTKASELGAQVVAYKQDGSTSATAYTWAWQGIN
CCCEEEEEEEEEECCHHCCCCEEEEEECCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]