| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476628
Identifier: 186476628
GI number: 186476628
Start: 2132278
End: 2133369
Strand: Reverse
Name: 186476628
Synonym: Bphy_1873
Alternate gene names: NA
Gene position: 2133369-2132278 (Counterclockwise)
Preceding gene: 186476629
Following gene: 186476627
Centisome position: 61.32
GC content: 61.17
Gene sequence:
>1092_bases ATGGTTGACGACGGAATCCTGCTCTCGATCGGCGATTACATGCTGTCGGGTTGGACGAGCCTGCGCTGCACTCGCGGAAT CGAACGGTTTCCGAGCGACTTTGAACTCGGTATGACCGAGCTGTTTCCGGGTCAGGCGAACGACGTCGTCGTGCAGGAGG GCGACCCGTTCATCTTGACGATCGGATTGGATCCCGTTGTGACCGGGTATATCGATCGCGTGGTGCCGAGCATCAACGCG AACATGCATGAGATCCGTGTCACGGGGCGCGGGAAGTGTCAGGATCTGCTCGACTGCGCGGCGCAGTGGCCGAACGGCCA GATCAGCAATTGCACCGCAGCCGACATCGCGGCGAAGCTCGCTGTGCCATACGACATCACCGTCAATTGCGATGTCACTG GTCTGCCGATCATCCCGCAGCAGAACATCATGCTCGGCGAGACCGCATACGAGATCATCGAGCGGTCTTCGCGCTTCAGC GCGTTGCTCGTCTACGAGGATCCCGACGGATCGCTGCGGCTCACGCGCGCAGGCACGGAGGTGATGGCGAGCGGCGTGCA GGAAGGCGTCAACATGGAAAGCGCCGCAGTGACGCGGTCTATGGACCAGCGCTATTCCGAGATCATGGCCGTCATGATCG GCACGAACAACCTGCAGGACCTGAATGCCGTCGATGCGCCAGTTTTCACGGCGACTGATCCCAACGTAAAACGGCATCGC AGACGCGTCGTGATTGCGGAGGCCGGTCAGTTGGGATGGGACGTCGGCAAGCAGCGTGCGCTATGGGAAGTCGCACGGCG CCGCGGACGCTCGGAGGTTGTGACGCTGACCGTCGACAACTGGCGCGACGTCGACGGGAATCTCTGGGAGCCAAACAAGC TCATCGACGTTCTGATTCCGTCGCTGAAGGTGGCGGGCGATCAGGCTGGCACTGTGCCCGTGCGGTATCTGATTGCCGAG GTGACATATCACCTTGGCCTTGAGGGCACTCATGCGGAACTGACGCTGATGGCGCCGGAAGCATTCACGCCGCAGCCGGT TCTCATCCAACCGCAATACGCAGACGTCATCGGAACAGTCCCCCAGCAATGA
Upstream 100 bases:
>100_bases GTATCGCGATTCGACGCGTGCGGAGGAGCTGGTGACGCAGGCGGATCCGATTCACCCGGCATTCATGCCCACGCAGTTCA ACGCTCTCTCAAGCTAAACG
Downstream 100 bases:
>100_bases GTGATCAGGTAGGAATTCTCGAACGCACCGCGCGGCGCGTTCTGCTGTCGCTCGCCCGCGCGCTGGTGACGACGGTGAAT GACGCCGGCGGATTTCAGCG
Product: Mu P family protein
Products: NA
Alternate protein names: Bacteriophage Mu P Protein; Mu P Family Protein; Bacteriophage Tail Protein; Bacteriophage Mu P; Phage Tail Protein; Mu-Like Prophage Tail Protein; Mu-Like Prophage Tail Protein GpP; Bacteriophage Related Protein; Bacteriophage Mu P Family Protein; Prophage; Mu-Like Phage Tail Protein GpP; Bacteriophage V Tail Protein; Mu-Like Phage P Protein; Bacteriophage Tail Protein GpP Mu-Like; Phage Baseplate Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MVDDGILLSIGDYMLSGWTSLRCTRGIERFPSDFELGMTELFPGQANDVVVQEGDPFILTIGLDPVVTGYIDRVVPSINA NMHEIRVTGRGKCQDLLDCAAQWPNGQISNCTAADIAAKLAVPYDITVNCDVTGLPIIPQQNIMLGETAYEIIERSSRFS ALLVYEDPDGSLRLTRAGTEVMASGVQEGVNMESAAVTRSMDQRYSEIMAVMIGTNNLQDLNAVDAPVFTATDPNVKRHR RRVVIAEAGQLGWDVGKQRALWEVARRRGRSEVVTLTVDNWRDVDGNLWEPNKLIDVLIPSLKVAGDQAGTVPVRYLIAE VTYHLGLEGTHAELTLMAPEAFTPQPVLIQPQYADVIGTVPQQ
Sequences:
>Translated_363_residues MVDDGILLSIGDYMLSGWTSLRCTRGIERFPSDFELGMTELFPGQANDVVVQEGDPFILTIGLDPVVTGYIDRVVPSINA NMHEIRVTGRGKCQDLLDCAAQWPNGQISNCTAADIAAKLAVPYDITVNCDVTGLPIIPQQNIMLGETAYEIIERSSRFS ALLVYEDPDGSLRLTRAGTEVMASGVQEGVNMESAAVTRSMDQRYSEIMAVMIGTNNLQDLNAVDAPVFTATDPNVKRHR RRVVIAEAGQLGWDVGKQRALWEVARRRGRSEVVTLTVDNWRDVDGNLWEPNKLIDVLIPSLKVAGDQAGTVPVRYLIAE VTYHLGLEGTHAELTLMAPEAFTPQPVLIQPQYADVIGTVPQQ >Mature_363_residues MVDDGILLSIGDYMLSGWTSLRCTRGIERFPSDFELGMTELFPGQANDVVVQEGDPFILTIGLDPVVTGYIDRVVPSINA NMHEIRVTGRGKCQDLLDCAAQWPNGQISNCTAADIAAKLAVPYDITVNCDVTGLPIIPQQNIMLGETAYEIIERSSRFS ALLVYEDPDGSLRLTRAGTEVMASGVQEGVNMESAAVTRSMDQRYSEIMAVMIGTNNLQDLNAVDAPVFTATDPNVKRHR RRVVIAEAGQLGWDVGKQRALWEVARRRGRSEVVTLTVDNWRDVDGNLWEPNKLIDVLIPSLKVAGDQAGTVPVRYLIAE VTYHLGLEGTHAELTLMAPEAFTPQPVLIQPQYADVIGTVPQQ
Specific function: Unknown
COG id: COG4379
COG function: function code R; Mu-like prophage tail protein gpP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39779; Mature: 39779
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDGILLSIGDYMLSGWTSLRCTRGIERFPSDFELGMTELFPGQANDVVVQEGDPFILT CCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCHHCCHHHCCCCCCCCEEEECCCCEEEE IGLDPVVTGYIDRVVPSINANMHEIRVTGRGKCQDLLDCAAQWPNGQISNCTAADIAAKL ECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHE AVPYDITVNCDVTGLPIIPQQNIMLGETAYEIIERSSRFSALLVYEDPDGSLRLTRAGTE ECCEEEEEECCCCCCCCCCCCCEEECHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHH VMASGVQEGVNMESAAVTRSMDQRYSEIMAVMIGTNNLQDLNAVDAPVFTATDPNVKRHR HHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCHHHHC RRVVIAEAGQLGWDVGKQRALWEVARRRGRSEVVTLTVDNWRDVDGNLWEPNKLIDVLIP EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHC SLKVAGDQAGTVPVRYLIAEVTYHLGLEGTHAELTLMAPEAFTPQPVLIQPQYADVIGTV CCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCCC PQQ CCC >Mature Secondary Structure MVDDGILLSIGDYMLSGWTSLRCTRGIERFPSDFELGMTELFPGQANDVVVQEGDPFILT CCCCCEEEEEHHHHHCCCHHHHHHHHHHHCCCCHHCCHHHCCCCCCCCEEEECCCCEEEE IGLDPVVTGYIDRVVPSINANMHEIRVTGRGKCQDLLDCAAQWPNGQISNCTAADIAAKL ECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHE AVPYDITVNCDVTGLPIIPQQNIMLGETAYEIIERSSRFSALLVYEDPDGSLRLTRAGTE ECCEEEEEECCCCCCCCCCCCCEEECHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHH VMASGVQEGVNMESAAVTRSMDQRYSEIMAVMIGTNNLQDLNAVDAPVFTATDPNVKRHR HHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEECCCCCHHHHC RRVVIAEAGQLGWDVGKQRALWEVARRRGRSEVVTLTVDNWRDVDGNLWEPNKLIDVLIP EEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHC SLKVAGDQAGTVPVRYLIAEVTYHLGLEGTHAELTLMAPEAFTPQPVLIQPQYADVIGTV CCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHCCC PQQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA