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The map label for this gene is yggA [C]

Identifier: 186476587

GI number: 186476587

Start: 2090810

End: 2091424

Strand: Direct

Name: yggA [C]

Synonym: Bphy_1830

Alternate gene names: 186476587

Gene position: 2090810-2091424 (Clockwise)

Preceding gene: 186476585

Following gene: 186476595

Centisome position: 60.09

GC content: 65.37

Gene sequence:

>615_bases
ATGAACTGGCTGGCTTTTTCGCACGGCGCCGCATTGTGCGCCTCGCTGATCGTCACGATTGGCGCACAAAACGCGTTCGT
ACTCCGTCAAGGCATCATGCGCTCGCACATCGGCAAGATCGTGCTGCTGTGCACGCTATCGGATTTCCTGCTGATCGGCG
CGGGCGTCGGTGGCGCGTCGGTGCTCGTCGAGCGCTATCCGACCTTTATTCACGCGCTGCTGTATGTGGGGCTCGCCTAT
CTCGCGTGGTTCGGCATCAGTGCGCTGCGGCGCGCGGTGCGCCCGCGCCATGCCGTGCTCGATACCGATGCGAACGGCGA
CACCGCGCCGCCGGCGCAGCGCGCGATGCCCATCGTGCTGATGACGCTCGCGTTCACGTGGCTCAATCCGCACGTCTATC
TGGATACGTTTTTGCTGATCGGCACGGCGGGAGCGCGTGAAGCGCAGGGTTTGCGCGCCGCGTTCGCAGTCGGCGCGATG
GCAGTGAGCGCGATCTGGTTCGTGGCGCTGGGATATGGTGCGCAGGCGCTTGCCCCGCTCTTCAAGCGCGCCACTGCATG
GCGCGTGCTGGATGGCGCGATCGGCAGCATGGTGTTGCTGCTGGCCGTCACGTAG

Upstream 100 bases:

>100_bases
CATTAGCGTTCCTTAATCGGCGTTACGGAAATTAGCTTCTCTTATTGTAGCCATCGCGGCACACTCTCGCCATCCAATCC
ATCCTTCTCTTCAAACCATC

Downstream 100 bases:

>100_bases
TTGCGCTGAGTGTCACTGAGTGTCAGTGAGCGTCACTGAGCGTCGGCGCCTGAACTTCACCTTCCTCAGCGGCGCCCTGT
CGCCGAGCACTGTGCCACCG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHIGKIVLLCTLSDFLLIGAGVGGASVLVERYPTFIHALLYVGLAY
LAWFGISALRRAVRPRHAVLDTDANGDTAPPAQRAMPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREAQGLRAAFAVGAM
AVSAIWFVALGYGAQALAPLFKRATAWRVLDGAIGSMVLLLAVT

Sequences:

>Translated_204_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHIGKIVLLCTLSDFLLIGAGVGGASVLVERYPTFIHALLYVGLAY
LAWFGISALRRAVRPRHAVLDTDANGDTAPPAQRAMPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREAQGLRAAFAVGAM
AVSAIWFVALGYGAQALAPLFKRATAWRVLDGAIGSMVLLLAVT
>Mature_204_residues
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHIGKIVLLCTLSDFLLIGAGVGGASVLVERYPTFIHALLYVGLAY
LAWFGISALRRAVRPRHAVLDTDANGDTAPPAQRAMPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREAQGLRAAFAVGAM
AVSAIWFVALGYGAQALAPLFKRATAWRVLDGAIGSMVLLLAVT

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=198, Percent_Identity=35.3535353535354, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21662; Mature: 21662

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHIGKIVLLCTLSDFLLIGAGVGGAS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VLVERYPTFIHALLYVGLAYLAWFGISALRRAVRPRHAVLDTDANGDTAPPAQRAMPIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHH
MTLAFTWLNPHVYLDTFLLIGTAGAREAQGLRAAFAVGAMAVSAIWFVALGYGAQALAPL
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FKRATAWRVLDGAIGSMVLLLAVT
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWLAFSHGAALCASLIVTIGAQNAFVLRQGIMRSHIGKIVLLCTLSDFLLIGAGVGGAS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VLVERYPTFIHALLYVGLAYLAWFGISALRRAVRPRHAVLDTDANGDTAPPAQRAMPIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHH
MTLAFTWLNPHVYLDTFLLIGTAGAREAQGLRAAFAVGAMAVSAIWFVALGYGAQALAPL
HHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FKRATAWRVLDGAIGSMVLLLAVT
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]