| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476432
Identifier: 186476432
GI number: 186476432
Start: 1898820
End: 1899974
Strand: Direct
Name: 186476432
Synonym: Bphy_1674
Alternate gene names: NA
Gene position: 1898820-1899974 (Clockwise)
Preceding gene: 186476431
Following gene: 186476433
Centisome position: 54.58
GC content: 63.2
Gene sequence:
>1155_bases ATGTCCCGTTTGCGTCGAGTCGTACTGGCCGTGTTTTGCGGCGCACTGACGGTAGCCGGCCTCGTCTTTATCAAACTGGG CGGGCCGGAACTGTTCCGCCGCCCGGCCGCCGCCGTCGCGGCCGGTTCGACGGGGTCCGCTGGGCGAATACGGCTTGCCG TGCTCGGGGATTCAAACAACCAGTCCTACCATGACACGCTGCTATTGAGCGATCCGAGCCTGCGCGGTGGAACCTTTCGC ACGACCACTTATCAGTGGACCGAGATTCTGGCGAGGCTCAGGGGTGACCAGATCGATCTCGGCGAGTGGGGGGCGTGGGG AACCAGCAAGTATCGCGCTTACGCCGACGAAGCATTTGGCTTTCTCGCCCGCACGCCCCCGAAGGACGACTACCGCTACA ATTTTTCCGTCAGCGGCGCGACCTGCAACCAGTTGATGGGACATCCGTCGCGCCAGGCGATCCGGCTAGTGAAACTGATG GACACCGAACCGCAAGCCTGGCGAGGCGGTATCGTGCTGATCCGCATCGGAGAGGCCGATTTCGGCGGTCAGGAGGTCCT CGACGAACTGGCTCATGATGCAAACGCACGGCGTCCCCTTGCCCTGATCGATGCCTGCACCCGCGCAATCGGCGACGCCG TCACCCTGATCCGGAAACGGCATCCGGATACCTATGTCGTACTCGTCGAAGCGATCGGCGATGCGAACTGGACGGGCGAC TACGACAATCCGCACTTTGCCAGCCACCTGGCCAATGTCGTCGCGGGCATCGATCGCTTCGACAATGGCTTGCGCAAGCT GGCCGCCGCGGATCGCCACGTGTATTTCCTCGATGACCGCCCCTGGTTGAACGCACTGTGGGGCGCGCGTGACGATCGGG GCCGTCCGCTCAACAAGACGCTGCACATGGCACCCGGCTGGGCAATCACGATGACACTGGGCGACGATCCGCACAACGCC GTTCTTGCCGACGGTCATGCCGGCGTAGTCTGGAACGCCCTTTGGGCGCAGCACCTCGTCACCGCGCTGAACGCCGCATT CGGATTCCGTTTCAAACCGATCACCGATGACGAGGTGATCGCCTTTCTGCAACCGGCCTTTACTGCAAGCGAGCGATCAG CCGCGCCACTGCCGGCGGCCTCGGCGAAAAACTGA
Upstream 100 bases:
>100_bases GAAATCGAGGCTGACAGCAACAAGGCCAGCGCCGGCGAGCAGCACGCGCCGTTAGACTGCGCAAGCCGTGCCGAAGCTTA GATCGTTGGGCGAACTGCTT
Downstream 100 bases:
>100_bases CCTCGCGCCGATGCCCTGCCATGCGTACGCCCTCGCACAAACATGTGATCGTTGATTGTTCACAATAAGTCCTCGAGTCG TGTAGGCGCGCGACCTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSRLRRVVLAVFCGALTVAGLVFIKLGGPELFRRPAAAVAAGSTGSAGRIRLAVLGDSNNQSYHDTLLLSDPSLRGGTFR TTTYQWTEILARLRGDQIDLGEWGAWGTSKYRAYADEAFGFLARTPPKDDYRYNFSVSGATCNQLMGHPSRQAIRLVKLM DTEPQAWRGGIVLIRIGEADFGGQEVLDELAHDANARRPLALIDACTRAIGDAVTLIRKRHPDTYVVLVEAIGDANWTGD YDNPHFASHLANVVAGIDRFDNGLRKLAAADRHVYFLDDRPWLNALWGARDDRGRPLNKTLHMAPGWAITMTLGDDPHNA VLADGHAGVVWNALWAQHLVTALNAAFGFRFKPITDDEVIAFLQPAFTASERSAAPLPAASAKN
Sequences:
>Translated_384_residues MSRLRRVVLAVFCGALTVAGLVFIKLGGPELFRRPAAAVAAGSTGSAGRIRLAVLGDSNNQSYHDTLLLSDPSLRGGTFR TTTYQWTEILARLRGDQIDLGEWGAWGTSKYRAYADEAFGFLARTPPKDDYRYNFSVSGATCNQLMGHPSRQAIRLVKLM DTEPQAWRGGIVLIRIGEADFGGQEVLDELAHDANARRPLALIDACTRAIGDAVTLIRKRHPDTYVVLVEAIGDANWTGD YDNPHFASHLANVVAGIDRFDNGLRKLAAADRHVYFLDDRPWLNALWGARDDRGRPLNKTLHMAPGWAITMTLGDDPHNA VLADGHAGVVWNALWAQHLVTALNAAFGFRFKPITDDEVIAFLQPAFTASERSAAPLPAASAKN >Mature_383_residues SRLRRVVLAVFCGALTVAGLVFIKLGGPELFRRPAAAVAAGSTGSAGRIRLAVLGDSNNQSYHDTLLLSDPSLRGGTFRT TTYQWTEILARLRGDQIDLGEWGAWGTSKYRAYADEAFGFLARTPPKDDYRYNFSVSGATCNQLMGHPSRQAIRLVKLMD TEPQAWRGGIVLIRIGEADFGGQEVLDELAHDANARRPLALIDACTRAIGDAVTLIRKRHPDTYVVLVEAIGDANWTGDY DNPHFASHLANVVAGIDRFDNGLRKLAAADRHVYFLDDRPWLNALWGARDDRGRPLNKTLHMAPGWAITMTLGDDPHNAV LADGHAGVVWNALWAQHLVTALNAAFGFRFKPITDDEVIAFLQPAFTASERSAAPLPAASAKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41925; Mature: 41794
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRRVVLAVFCGALTVAGLVFIKLGGPELFRRPAAAVAAGSTGSAGRIRLAVLGDSNN CHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHHEECCCCCCCCEEEEEEEECCCC QSYHDTLLLSDPSLRGGTFRTTTYQWTEILARLRGDQIDLGEWGAWGTSKYRAYADEAFG CCEEEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHH FLARTPPKDDYRYNFSVSGATCNQLMGHPSRQAIRLVKLMDTEPQAWRGGIVLIRIGEAD HHHCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC FGGQEVLDELAHDANARRPLALIDACTRAIGDAVTLIRKRHPDTYVVLVEAIGDANWTGD CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC YDNPHFASHLANVVAGIDRFDNGLRKLAAADRHVYFLDDRPWLNALWGARDDRGRPLNKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCCE LHMAPGWAITMTLGDDPHNAVLADGHAGVVWNALWAQHLVTALNAAFGFRFKPITDDEVI EEECCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHH AFLQPAFTASERSAAPLPAASAKN HHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLRRVVLAVFCGALTVAGLVFIKLGGPELFRRPAAAVAAGSTGSAGRIRLAVLGDSNN HHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHHEECCCCCCCCEEEEEEEECCCC QSYHDTLLLSDPSLRGGTFRTTTYQWTEILARLRGDQIDLGEWGAWGTSKYRAYADEAFG CCEEEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHH FLARTPPKDDYRYNFSVSGATCNQLMGHPSRQAIRLVKLMDTEPQAWRGGIVLIRIGEAD HHHCCCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCC FGGQEVLDELAHDANARRPLALIDACTRAIGDAVTLIRKRHPDTYVVLVEAIGDANWTGD CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC YDNPHFASHLANVVAGIDRFDNGLRKLAAADRHVYFLDDRPWLNALWGARDDRGRPLNKT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCCCCCCCCCE LHMAPGWAITMTLGDDPHNAVLADGHAGVVWNALWAQHLVTALNAAFGFRFKPITDDEVI EEECCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHH AFLQPAFTASERSAAPLPAASAKN HHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA