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The map label for this gene is rfbX [C]

Identifier: 186476433

GI number: 186476433

Start: 1900125

End: 1901417

Strand: Direct

Name: rfbX [C]

Synonym: Bphy_1675

Alternate gene names: 186476433

Gene position: 1900125-1901417 (Clockwise)

Preceding gene: 186476432

Following gene: 186476443

Centisome position: 54.61

GC content: 61.41

Gene sequence:

>1293_bases
ATGGATCAGGTGAAGTCCTCGAAGGCCCGCACGGAGCTTGCTGCGACGTATTTCGCGTACGCCCTGCGTTACGTTTACCC
CCTCCTGCTGCTGCCGTTTTACGGCAGAACGCTAGGACCGGCCGGCTACGGCGTTGTGCTCGCCGGCATGTCGCTGTCGA
ATACGATCTGGCGCTTCGTGTGCTTCGGATTCCCGACCGTCGGCGGCCGCGATGCCGTCCACGCCACCCACGACACCGAA
CGCGCGGCAATCCTGTCTAGCCAGATGACAGGCCGCATGCTGCTGGGCATCCCGATCGCGCTGTGCGGATTCGGCGCGGT
CGCGCTCTCGCCCGCACTGTCGGCCCATCCATTGCTAGGCTGCACCGCGGTTCTGCTCGGCCTGCTCGCTGCATTCAACC
TGGGCTGGTATTTCACCAGCACGGGACGAGTCAGAAGAAGTGTCATGATCGAGATCGTCGGATTTATCGCCTCGCTCGTG
CTCATCTTCTCGTTCGTCCATCGCCCATCCGATCTCTCGCTGGTTTTCCCGCTGCTGCTCACCTCAGCGCTCATACAAAC
AGCGCTTGCTTACGGATTCGTCAGGCGCGAGTTCTCCGGATGGTTCTCCTCGATCCGGGCCGGCATCGAATTGATCCATC
GCTCGAAGACCATTTTCATCTACACCAGCACGTCGATTCTGTTGATCACCGCCTCGACCTATGTCCTGTCCGTGTTCGCG
CCCGCATCCGAGGTGGGCGCGTTCGGCGTGGCCGAACGGCTCATTGCTGTCGCGCTCAGCCTGACCGTCCCTGCCACCCA
GGTTCTGGTTCCGAAGGTCACGTATCTGGTCGGCACAGATCCCGCGAAAGCCAACCGCGTCTCGTTCCAGATATTGATCT
TCTTCTTCGTCGGTGCAATCGGCGCAGTCGCCTGCACGATGCTGCTCGCCGACTGGGCCGTGCCGCTCGTGATGGGTAAC
GGCTTTCAGCACGCCGTCACCGTGCTGAAGGTTTTCGTGCTGGTCTTGCCGTTGAATGTCATCAACCAGGTCATCGTCCT
TTATTTCCTGATTCCCCGCAATCGCGACGCTCTGCTCGCTCGCTCCGGTGTGGCGACCGCCTGCGTCAATATCGTCATCG
CCGTTCCGCTCGCGATGCATTGGGGGGCGATGGGCATGGTGGCCGCGCGTCTGTTCGGAGAACTGATGTTGCTGACGGTC
CTCATCGTCAATATGACCCGGTCCGGTCTGATGGGCGAGATCCTGTCGACCCATCCCACCGTTCTTGCCTTGCGCCCCCG
CGGCGAAGGTTGA

Upstream 100 bases:

>100_bases
GTTGATTGTTCACAATAAGTCCTCGAGTCGTGTAGGCGCGCGACCTCGCCACGCATCGACGCATGCAAACAACAATCAGG
TTCGGCTACACGGTACGATC

Downstream 100 bases:

>100_bases
CGTTTCCTTCCTGACGAGCAGGCGAGCGCGTCGTCTACGATGCCGCGAGCCCGTCACCATCCGCCCGTGGACCAGTTTGC
CCGTCGCTCACCGCGAAGCG

Product: polysaccharide biosynthesis protein

Products: lipopolysaccharide [Periplasm] [C]

Alternate protein names: O-Antigen Transporter; O-Antigen Transporter RfbX

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MDQVKSSKARTELAATYFAYALRYVYPLLLLPFYGRTLGPAGYGVVLAGMSLSNTIWRFVCFGFPTVGGRDAVHATHDTE
RAAILSSQMTGRMLLGIPIALCGFGAVALSPALSAHPLLGCTAVLLGLLAAFNLGWYFTSTGRVRRSVMIEIVGFIASLV
LIFSFVHRPSDLSLVFPLLLTSALIQTALAYGFVRREFSGWFSSIRAGIELIHRSKTIFIYTSTSILLITASTYVLSVFA
PASEVGAFGVAERLIAVALSLTVPATQVLVPKVTYLVGTDPAKANRVSFQILIFFFVGAIGAVACTMLLADWAVPLVMGN
GFQHAVTVLKVFVLVLPLNVINQVIVLYFLIPRNRDALLARSGVATACVNIVIAVPLAMHWGAMGMVAARLFGELMLLTV
LIVNMTRSGLMGEILSTHPTVLALRPRGEG

Sequences:

>Translated_430_residues
MDQVKSSKARTELAATYFAYALRYVYPLLLLPFYGRTLGPAGYGVVLAGMSLSNTIWRFVCFGFPTVGGRDAVHATHDTE
RAAILSSQMTGRMLLGIPIALCGFGAVALSPALSAHPLLGCTAVLLGLLAAFNLGWYFTSTGRVRRSVMIEIVGFIASLV
LIFSFVHRPSDLSLVFPLLLTSALIQTALAYGFVRREFSGWFSSIRAGIELIHRSKTIFIYTSTSILLITASTYVLSVFA
PASEVGAFGVAERLIAVALSLTVPATQVLVPKVTYLVGTDPAKANRVSFQILIFFFVGAIGAVACTMLLADWAVPLVMGN
GFQHAVTVLKVFVLVLPLNVINQVIVLYFLIPRNRDALLARSGVATACVNIVIAVPLAMHWGAMGMVAARLFGELMLLTV
LIVNMTRSGLMGEILSTHPTVLALRPRGEG
>Mature_430_residues
MDQVKSSKARTELAATYFAYALRYVYPLLLLPFYGRTLGPAGYGVVLAGMSLSNTIWRFVCFGFPTVGGRDAVHATHDTE
RAAILSSQMTGRMLLGIPIALCGFGAVALSPALSAHPLLGCTAVLLGLLAAFNLGWYFTSTGRVRRSVMIEIVGFIASLV
LIFSFVHRPSDLSLVFPLLLTSALIQTALAYGFVRREFSGWFSSIRAGIELIHRSKTIFIYTSTSILLITASTYVLSVFA
PASEVGAFGVAERLIAVALSLTVPATQVLVPKVTYLVGTDPAKANRVSFQILIFFFVGAIGAVACTMLLADWAVPLVMGN
GFQHAVTVLKVFVLVLPLNVINQVIVLYFLIPRNRDALLARSGVATACVNIVIAVPLAMHWGAMGMVAARLFGELMLLTV
LIVNMTRSGLMGEILSTHPTVLALRPRGEG

Specific function: May Be Involved In The Translocation Process Of The Nascent O-Polysaccharide Molecules And/Or Its Ligation To Lipid A Core Units. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46175; Mature: 46175

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVKSSKARTELAATYFAYALRYVYPLLLLPFYGRTLGPAGYGVVLAGMSLSNTIWRFV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCHHHHHHHHHH
CFGFPTVGGRDAVHATHDTERAAILSSQMTGRMLLGIPIALCGFGAVALSPALSAHPLLG
HHCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHH
CTAVLLGLLAAFNLGWYFTSTGRVRRSVMIEIVGFIASLVLIFSFVHRPSDLSLVFPLLL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TSALIQTALAYGFVRREFSGWFSSIRAGIELIHRSKTIFIYTSTSILLITASTYVLSVFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEHHHHHHHCC
PASEVGAFGVAERLIAVALSLTVPATQVLVPKVTYLVGTDPAKANRVSFQILIFFFVGAI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHH
GAVACTMLLADWAVPLVMGNGFQHAVTVLKVFVLVLPLNVINQVIVLYFLIPRNRDALLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RSGVATACVNIVIAVPLAMHWGAMGMVAARLFGELMLLTVLIVNMTRSGLMGEILSTHPT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
VLALRPRGEG
EEEECCCCCC
>Mature Secondary Structure
MDQVKSSKARTELAATYFAYALRYVYPLLLLPFYGRTLGPAGYGVVLAGMSLSNTIWRFV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEECCHHHHHHHHHH
CFGFPTVGGRDAVHATHDTERAAILSSQMTGRMLLGIPIALCGFGAVALSPALSAHPLLG
HHCCCCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHHH
CTAVLLGLLAAFNLGWYFTSTGRVRRSVMIEIVGFIASLVLIFSFVHRPSDLSLVFPLLL
HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TSALIQTALAYGFVRREFSGWFSSIRAGIELIHRSKTIFIYTSTSILLITASTYVLSVFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEHHHHHHHCC
PASEVGAFGVAERLIAVALSLTVPATQVLVPKVTYLVGTDPAKANRVSFQILIFFFVGAI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHH
GAVACTMLLADWAVPLVMGNGFQHAVTVLKVFVLVLPLNVINQVIVLYFLIPRNRDALLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RSGVATACVNIVIAVPLAMHWGAMGMVAARLFGELMLLTVLIVNMTRSGLMGEILSTHPT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
VLALRPRGEG
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: lipopolysaccharide [Cytoplasm] [C]

Specific reaction: lipopolysaccharide [Cytoplasm] = lipopolysaccharide [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA