| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fsr [H]
Identifier: 186476345
GI number: 186476345
Start: 1798208
End: 1799446
Strand: Direct
Name: fsr [H]
Synonym: Bphy_1587
Alternate gene names: 186476345
Gene position: 1798208-1799446 (Clockwise)
Preceding gene: 186476343
Following gene: 186476346
Centisome position: 51.68
GC content: 60.77
Gene sequence:
>1239_bases ATGGAAACCAGCCTCGACAAAGGCGCCCTGGCTGGCGCCGCTGCTTCGGCTTCCGCCAAGCCGCAAGCGAAGACCGTTTA TTCGATTCTTGGCGCGATCAGCTTTTCGCATCTGATGAACGACATGATCCAGTCGTTGATCCTCGCGATCTATCCGATGC TGAAAGCTAATTTTTCGCTGTCGTTCGGACAGATCGGGCTGATCACGCTGACGTACCAGATCACGGCGTCGCTGCTGCAG CCGCTCGTCGGCTTTTACACCGACAAGCATCCGAAGCCGTACTCCCTACCCGTCGGCATGGGCTTCACGTTGTCGGGGTT GCTGCTCATGTCGGTCGCGCCGAGCTTCGGCGTGCTGCTGATTGCGGCGGCGCTGGTCGGCTGCGGGTCGTCGGTATTTC ACCCGGAGTCGTCGCGTGTCGCGCGCATGGCGTCGGGCGGCAAGCATGGTCTGGCGCAGTCGCTGTTTCAGGTGGGCGGC AACGCGGGTTCGTCGCTTGGACCGCTGCTTGCCGCGCTCATTGTGATTCCGCATGGGCAGCGCAGCATCGCGTGGTTCTC GGCGGCGGCGCTCGTTGGCATCATGGTGCTGACGCACATCAGCCGCTGGTACAAGCACCATCCGGCGACCAGGAAGGCGC GTGCGGCGCAGTCTGCGCACATGACGCTGTCGCGCGGCAAGGTGGCATTCGCGATGAGCATTCTGGTTCTGCTGGTTTTC TCGAAGTACTTCTACCTGACGAGCATCAACAGCTACTTCACGTTCTATCTGATCGACAAGTTCCATCTGCCCGTGCAGGC TGCGCAAGTGCATCTGTTCGTGTTCCTGGCGGCGGTGGCGGCGGGCACGGTGATCGGCGGGCCGGTGGGCGACCGGATCG GCCGCAAGTACGTGATCTGGGTATCGATTCTTGGCGTGGCGCCGTTCACGCTGCTGTTGCCATATGCGAACCTGTTCTGG ACGGGCGTACTGACGGTGATCATCGGGATTGTGCTGGCTTCGGCTTTCTCGGCGATTCTCGTGTATGCGCAGGAATTGAT TCCGGGGAAGGTCGGGATGGTGGCCGGTCTGTTCTTCGGGTTCGCGTTCGGGCTTGGAGGCATTGGTGCTGCCGTGCTTG GGCAACTGGCCGATGCCACCAGCATTCCTTACGTCTACAAGGTTTGCTCGTTCTTGCCGTTGCTGGGGGTTTTGACTGTT TTCCTGCCGGATATTGAAGGGAAGCGCTTCAACGCATGA
Upstream 100 bases:
>100_bases GACAAACTACACTTCAACGAACGCTAAAAACATTGTCGCCGCCACGGTTTGCCGCAACTGCTGGCGCGTGCGTCCGAACC ACTCTCTCCTGACCGACCAC
Downstream 100 bases:
>100_bases TGTTTTTGCCTGCGGCGCAGGGTTGCCCGGTTGTGGTTTTGGTTTCTGCTTGCATCCGCGTGTTGGCTTTTGCCAGCGAA AGAAACGCGCTCGCCAGCAA
Product: major facilitator transporter
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues METSLDKGALAGAAASASAKPQAKTVYSILGAISFSHLMNDMIQSLILAIYPMLKANFSLSFGQIGLITLTYQITASLLQ PLVGFYTDKHPKPYSLPVGMGFTLSGLLLMSVAPSFGVLLIAAALVGCGSSVFHPESSRVARMASGGKHGLAQSLFQVGG NAGSSLGPLLAALIVIPHGQRSIAWFSAAALVGIMVLTHISRWYKHHPATRKARAAQSAHMTLSRGKVAFAMSILVLLVF SKYFYLTSINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPVGDRIGRKYVIWVSILGVAPFTLLLPYANLFW TGVLTVIIGIVLASAFSAILVYAQELIPGKVGMVAGLFFGFAFGLGGIGAAVLGQLADATSIPYVYKVCSFLPLLGVLTV FLPDIEGKRFNA
Sequences:
>Translated_412_residues METSLDKGALAGAAASASAKPQAKTVYSILGAISFSHLMNDMIQSLILAIYPMLKANFSLSFGQIGLITLTYQITASLLQ PLVGFYTDKHPKPYSLPVGMGFTLSGLLLMSVAPSFGVLLIAAALVGCGSSVFHPESSRVARMASGGKHGLAQSLFQVGG NAGSSLGPLLAALIVIPHGQRSIAWFSAAALVGIMVLTHISRWYKHHPATRKARAAQSAHMTLSRGKVAFAMSILVLLVF SKYFYLTSINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPVGDRIGRKYVIWVSILGVAPFTLLLPYANLFW TGVLTVIIGIVLASAFSAILVYAQELIPGKVGMVAGLFFGFAFGLGGIGAAVLGQLADATSIPYVYKVCSFLPLLGVLTV FLPDIEGKRFNA >Mature_412_residues METSLDKGALAGAAASASAKPQAKTVYSILGAISFSHLMNDMIQSLILAIYPMLKANFSLSFGQIGLITLTYQITASLLQ PLVGFYTDKHPKPYSLPVGMGFTLSGLLLMSVAPSFGVLLIAAALVGCGSSVFHPESSRVARMASGGKHGLAQSLFQVGG NAGSSLGPLLAALIVIPHGQRSIAWFSAAALVGIMVLTHISRWYKHHPATRKARAAQSAHMTLSRGKVAFAMSILVLLVF SKYFYLTSINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPVGDRIGRKYVIWVSILGVAPFTLLLPYANLFW TGVLTVIIGIVLASAFSAILVYAQELIPGKVGMVAGLFFGFAFGLGGIGAAVLGQLADATSIPYVYKVCSFLPLLGVLTV FLPDIEGKRFNA
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=408, Percent_Identity=68.3823529411765, Blast_Score=521, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43551; Mature: 43551
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSLDKGALAGAAASASAKPQAKTVYSILGAISFSHLMNDMIQSLILAIYPMLKANFSL CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SFGQIGLITLTYQITASLLQPLVGFYTDKHPKPYSLPVGMGFTLSGLLLMSVAPSFGVLL CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH IAAALVGCGSSVFHPESSRVARMASGGKHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC RSIAWFSAAALVGIMVLTHISRWYKHHPATRKARAAQSAHMTLSRGKVAFAMSILVLLVF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SKYFYLTSINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPVGDRIGRKYVIW HHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEHH VSILGVAPFTLLLPYANLFWTGVLTVIIGIVLASAFSAILVYAQELIPGKVGMVAGLFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FAFGLGGIGAAVLGQLADATSIPYVYKVCSFLPLLGVLTVFLPDIEGKRFNA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure METSLDKGALAGAAASASAKPQAKTVYSILGAISFSHLMNDMIQSLILAIYPMLKANFSL CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SFGQIGLITLTYQITASLLQPLVGFYTDKHPKPYSLPVGMGFTLSGLLLMSVAPSFGVLL CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHH IAAALVGCGSSVFHPESSRVARMASGGKHGLAQSLFQVGGNAGSSLGPLLAALIVIPHGQ HHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC RSIAWFSAAALVGIMVLTHISRWYKHHPATRKARAAQSAHMTLSRGKVAFAMSILVLLVF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SKYFYLTSINSYFTFYLIDKFHLPVQAAQVHLFVFLAAVAAGTVIGGPVGDRIGRKYVIW HHHHHHHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEHH VSILGVAPFTLLLPYANLFWTGVLTVIIGIVLASAFSAILVYAQELIPGKVGMVAGLFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FAFGLGGIGAAVLGQLADATSIPYVYKVCSFLPLLGVLTVFLPDIEGKRFNA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]