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The map label for this gene is ydhJ [H]

Identifier: 186476343

GI number: 186476343

Start: 1795078

End: 1795938

Strand: Direct

Name: ydhJ [H]

Synonym: Bphy_1585

Alternate gene names: 186476343

Gene position: 1795078-1795938 (Clockwise)

Preceding gene: 186476342

Following gene: 186476345

Centisome position: 51.59

GC content: 61.32

Gene sequence:

>861_bases
ATGACTATCAGAAACATCATCGGATTTATCGCGACGGCCATCGTGTTCGTCGTCGCGATCCTGATCGGGCGTGCGCTGTG
GGTGCACTACATGGACGAGCCATGGACGCGCGATGGCCGCGTGCGCGCCGAAGTCGTCAACATTGCGCCGGACGTATCGG
GCGCGGTGGTTGCACTGCCTGTGCGCGACAACCAGTTCGTGCACAAGGGCGACCTGCTGATGCAGATCGATCCGTCGCAC
TACCAGATCGCCGTCGAGCAGGCGCAGGCTGCTGTCGCCGCGCGCAAGTCGGAGTTGCAGATGCGGCGCGACGATGCGCA
GCGGCGCGCGGACATGGACAGCCTCGTGGTGTCGAAGGAGAGCCGAGAGAACGCAACGCATACGGCGTCGGCTGCCGAAG
CGCAATACCAGCAGGCGCTGGCCGCTCTGGATGCCGCGAAGCTGAACCTCGAGCGCACGCGGGTCGTGGCGCCTGTCGAC
GGCTACGTGACGAACCTGAACGTATATCGCGGCGATTATGCGATTGCCGGATCGGCGAAGCTGGCAGTCGTCGACAGCAA
TTCGTTCTGGGTTTATGGCTACTTTGAAGAGACGAAACTGCCACATGTGAAGGTCGGCGACAAGGCCGATATCCGGCTGA
TGAGCGGCGGCACGCTGAAGGGGCACGTCGAGAGTATTTCTCGCGGGATTTATGATCGCGATAATCCGCAGAGCCGTGAG
TTGCTTGCTGATGTGAATCCGACTTTCAACTGGGTGCGGTTGGCGCAGCGCGTGCCGGTGCGGGTGAAGATCGATTCTGT
GCCTGACGGTGTACTGTTGTCCGCTGGCACGACGTGTACTGTGGTTGTTACGCCATCCTGA

Upstream 100 bases:

>100_bases
GCGTCGTGTGGCATCCATCCCTGTTCCGTGCAAGCCTGCTCGTGTGTGTGTGCGGCGTACTGGGCCTCGGGGTTTATCGT
TGAACGAGTCGAATCGAATC

Downstream 100 bases:

>100_bases
CGTTTTTTGTCTGCGACGCGGTGTTGCCGGTTTTGGTTTTTTGCTTTTGCTTTTGCTGGCATCCGCGTTGTGTTTCCGGT
TGGCTGGTGTTGCCCCTATG

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MTIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALPVRDNQFVHKGDLLMQIDPSH
YQIAVEQAQAAVAARKSELQMRRDDAQRRADMDSLVVSKESRENATHTASAAEAQYQQALAALDAAKLNLERTRVVAPVD
GYVTNLNVYRGDYAIAGSAKLAVVDSNSFWVYGYFEETKLPHVKVGDKADIRLMSGGTLKGHVESISRGIYDRDNPQSRE
LLADVNPTFNWVRLAQRVPVRVKIDSVPDGVLLSAGTTCTVVVTPS

Sequences:

>Translated_286_residues
MTIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALPVRDNQFVHKGDLLMQIDPSH
YQIAVEQAQAAVAARKSELQMRRDDAQRRADMDSLVVSKESRENATHTASAAEAQYQQALAALDAAKLNLERTRVVAPVD
GYVTNLNVYRGDYAIAGSAKLAVVDSNSFWVYGYFEETKLPHVKVGDKADIRLMSGGTLKGHVESISRGIYDRDNPQSRE
LLADVNPTFNWVRLAQRVPVRVKIDSVPDGVLLSAGTTCTVVVTPS
>Mature_285_residues
TIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALPVRDNQFVHKGDLLMQIDPSHY
QIAVEQAQAAVAARKSELQMRRDDAQRRADMDSLVVSKESRENATHTASAAEAQYQQALAALDAAKLNLERTRVVAPVDG
YVTNLNVYRGDYAIAGSAKLAVVDSNSFWVYGYFEETKLPHVKVGDKADIRLMSGGTLKGHVESISRGIYDRDNPQSREL
LADVNPTFNWVRLAQRVPVRVKIDSVPDGVLLSAGTTCTVVVTPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=284, Percent_Identity=47.5352112676056, Blast_Score=252, Evalue=2e-68,
Organism=Escherichia coli, GI1789637, Length=283, Percent_Identity=44.5229681978799, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1790519, Length=307, Percent_Identity=29.3159609120521, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788711, Length=308, Percent_Identity=26.9480519480519, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789041, Length=302, Percent_Identity=26.4900662251656, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082036, Length=136, Percent_Identity=33.0882352941176, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790012, Length=274, Percent_Identity=24.0875912408759, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87081796, Length=186, Percent_Identity=27.4193548387097, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 31411; Mature: 31280

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALP
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VRDNQFVHKGDLLMQIDPSHYQIAVEQAQAAVAARKSELQMRRDDAQRRADMDSLVVSKE
ECCCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCC
SRENATHTASAAEAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLNVYRGDYAIAGSAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEEEEECCEEEECCEE
LAVVDSNSFWVYGYFEETKLPHVKVGDKADIRLMSGGTLKGHVESISRGIYDRDNPQSRE
EEEEECCCEEEEEEEECCCCCEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCHH
LLADVNPTFNWVRLAQRVPVRVKIDSVPDGVLLSAGTTCTVVVTPS
HEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECC
>Mature Secondary Structure 
TIRNIIGFIATAIVFVVAILIGRALWVHYMDEPWTRDGRVRAEVVNIAPDVSGAVVALP
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEECCCCCCCEEEEE
VRDNQFVHKGDLLMQIDPSHYQIAVEQAQAAVAARKSELQMRRDDAQRRADMDSLVVSKE
ECCCCEEECCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCC
SRENATHTASAAEAQYQQALAALDAAKLNLERTRVVAPVDGYVTNLNVYRGDYAIAGSAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEEEEEECCEEEECCEE
LAVVDSNSFWVYGYFEETKLPHVKVGDKADIRLMSGGTLKGHVESISRGIYDRDNPQSRE
EEEEECCCEEEEEEEECCCCCEEECCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCHH
LLADVNPTFNWVRLAQRVPVRVKIDSVPDGVLLSAGTTCTVVVTPS
HEECCCCCHHHHHHHHHCCEEEEECCCCCCEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]