| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yggX [C]
Identifier: 186476248
GI number: 186476248
Start: 1686246
End: 1686521
Strand: Direct
Name: yggX [C]
Synonym: Bphy_1490
Alternate gene names: 186476248
Gene position: 1686246-1686521 (Clockwise)
Preceding gene: 186476247
Following gene: 186476249
Centisome position: 48.47
GC content: 57.61
Gene sequence:
>276_bases ATGACTCGCATGGTTCAATGCACGAAGCTCGGCAAGGAAGCCGAAGGTCTCGATTTTCCGCCGCTGCCGGGCGAACTCGG CAAACGGATCTACGAGAGCATTTCGAAGGAAGCATGGCAGCAGTGGCTCAAGCAGCAGACCATGCTGATCAACGAAAACC GGCTCAATATGGCCGATCCGCGCGCGCGTCAGTACCTGATGAAGCAGACGGAGAAGTTCTTTTTTGGCGAAGGCGCCGAT CAGGCTTCGGGCTACGTGCCGCCTGCACAAGGCTGA
Upstream 100 bases:
>100_bases TACAACTGGCAGCGCAAGTCGCTCGTGCTGATGAAACAGCTCTGAGCGCGCACAATAACGCCGCGACGCCGTTACATATC GATTACAGGAGAAGCACAGC
Downstream 100 bases:
>100_bases TCTGCCCCGCGGGCATGTGTCTCGAATCCCAACCATCCGCGCTCGATGCGCGGATTTTTTTCGTGTGCATTCCATGCGCG TCGGCCCGCCGCCCGCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTRMVQCTKLGKEAEGLDFPPLPGELGKRIYESISKEAWQQWLKQQTMLINENRLNMADPRARQYLMKQTEKFFFGEGAD QASGYVPPAQG
Sequences:
>Translated_91_residues MTRMVQCTKLGKEAEGLDFPPLPGELGKRIYESISKEAWQQWLKQQTMLINENRLNMADPRARQYLMKQTEKFFFGEGAD QASGYVPPAQG >Mature_90_residues TRMVQCTKLGKEAEGLDFPPLPGELGKRIYESISKEAWQQWLKQQTMLINENRLNMADPRARQYLMKQTEKFFFGEGADQ ASGYVPPAQG
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=51.7241379310345, Blast_Score=92, Evalue=6e-21,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_BURP8 (B2JJC9)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857718.1 - ProteinModelPortal: B2JJC9 - SMR: B2JJC9 - GeneID: 6242981 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1490 - HOGENOM: HBG289800 - OMA: SKQTMLI - ProtClustDB: PRK05408 - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10425; Mature: 10294
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMVQCTKLGKEAEGLDFPPLPGELGKRIYESISKEAWQQWLKQQTMLINENRLNMADP CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RARQYLMKQTEKFFFGEGADQASGYVPPAQG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRMVQCTKLGKEAEGLDFPPLPGELGKRIYESISKEAWQQWLKQQTMLINENRLNMADP CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RARQYLMKQTEKFFFGEGADQASGYVPPAQG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA